 |
Job Description | Q9JMS9 | Confidence | 5.62% | Date | Thu Jan 5 12:38:05 GMT 2012 |
Rank | 14 | Aligned Residues | 44 |
% Identity | 11% | Template | c3p5rB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:taxadiene synthase; |
PDBTitle: crystal structure of taxadiene synthase from pacific yew (taxus2 brevifolia) in complex with mg2+ and 2-fluorogeranylgeranyl3 diphosphate
|
Resolution | 2.25 Å |
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | G | C | L | E | I | Q | G | A | S | L | A | G | S | G | S | G | G | E | H | A | A | V | L | Y | S | L | I | G | T | C | R | L | N | N | V | E | L | E | K | W | L | C | Y | G | I | E | H | I | Q | D |
Query Conservation |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
| . |
|
|
|
|
|   |
|   |   |   | . | . | . | . | . | . | . |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
K | I | M | R | F | Q | S | K | D | G | S | F | L | S | S | P | . |
A | S | T | A | C | V | L | M | N | T | . |
. |
. |
. |
. |
. |
. |
G | D | E | K | C | F | T | F | L | N | N | L | L | D | K | F | G | G |
Template Known Secondary structure |   |
G | G | G | G | G |
|
| T | T | S |
| B | T | T | B |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | |
. | . | . | . | . | 320 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|