Job Description P0AGC7 Confidence 48.04% Date Thu Jan 5 11:28:46 GMT 2012 Rank 5 Aligned Residues 119 % Identity 13% Template c3pjvD_ PDB info PDB header:lyase Chain: D: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd periplasmic domain Resolution 1.77 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	H	Q	R	Q	R	N	P	Q	L	E	E	L	A	R	T	L	A	R	Q	V	T	L	N	V	A	P	L	M	R	T	D	S	P	D	E	K	R	I	Q	A	I	L	D	Q	L	T	D	E	S	R	I	L	D	A	G	V	Y	D	E	Q	G	D	L	I	A	R	S	G	E	S	V	E	V	R	D	R	L	A
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		E	S	S	R	T	Q	Y	V	N	Q	L	R	S	H	A	Q	D	A	A	T	A	L	A	L	S	L	T	P	N	I	.	.	.	.	D	D	P	A	X	V	E	L	L	V	S	S	I	F	D	S	G	Y	Y	S	S	I	R	V	V	D	L	K	T	D	Q	T	I	V	E	R	N	G	I	P	A	V	T	N	V	P
Template Known Secondary structure																												G	G	G	T	.	.	.	.	T														T	T	S			S							T	T	T												S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	G	K	K	A	G	G	Y	F	N	Q	Q	I	V	E	P	I	A	G	K	N	G	P	L	G	Y	L	R	L	T	L	D	T	H	T	L	A	T	E	A	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	W	F	V	K	L	I	G	L	E	P	A	G	G	D	A	L	V	S	R	G	W	E	Q	A	A	R	V	E	V	V	S	H	P	X	F	A	L	A	K	L	W	Q
Template Known Secondary structure																						T	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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