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Job DescriptionP0AGC7
Confidence2.39%DateThu Jan 5 11:28:46 GMT 2012
Rank43Aligned Residues122
% Identity11%Templatec3lifA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:putative diguanylate cyclase (ggdef) with pas/pac domain; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase rphk1s-z16
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  SQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRL
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Template Sequence  XRNLSHSLAEHATHTFQGADVVLDDIVSFXKWRPHPSPVFNERLRALADNLPQLSDVAILDADGQLTYASVKPVPALDNS
Template Known Secondary structure  T
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   56...60.........70.........80.........90.........100.........110.........120.........130.....
 
   114.... .120.........130.... .....140.........150.....
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Query Sequence  ALDGK. . . . . . . . . . . . . . . . . . . KAGGYFNQQIVEPIAG. KNGPLGYLRLTLDTHTLATEA
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Template Sequence  DRSYFRYHRANDDHTLLITGPIQSRTSGVWVFVVSRRLETTDGKFFGVVVATIESEYFSTFY
Template Known Secondary structure  TS






TTT


TT


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   136...140.........150.........160.........170.........180.........190.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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