Return to main results Retrieve Phyre Job Id

Job DescriptionP77179
Confidence7.79%DateThu Jan 5 12:26:01 GMT 2012
Rank21Aligned Residues14
% Identity29%Templatec3mlqB_
PDB info PDB header:transferase/transcriptionChain: B: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.......
Predicted Secondary structure 

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Query Sequence  VLGSLREIIGNGTL
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Template Conservation         

    
Template Sequence  LEAALREFFSRSQL
Template Known Secondary structure  S
Template Predicted Secondary structure 




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   378.380.........390.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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