Job Description P24240 Confidence 49.38% Date Thu Jan 5 11:41:32 GMT 2012 Rank 265 Aligned Residues 103 % Identity 12% Template d3bmva4 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		P	E	S	F	L	W	G	G	A	L	A	A	N	Q	S	E	G	A	F	R	E	G	D	K	G	L	T	T	V	D	M	I	P	H	G	E	H	R	M	A	V	K	L	G	L	E	K	R	F	Q	L	R	D	D	E	F	Y	P	S	H	E	A	T	D	F	Y	H	R	Y	K	E	D	I	A	L	.	.	M	A	E
Query Conservation																																																																													.	.
Alig confidence								.									.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.									.	.
Template Conservation								.									.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Sequence		S	N	V	V	N	Y	.	S	T	D	V	I	Y	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	V	T	D	R	F	V	D	G	N	T	S	N	N	P	T	G	D	L	Y	D	P	T	H	T	S	L	K	K	Y	F	G	G	D	W	Q	.	.	.	.	.	G	I	I	N	K	I	N	D	G	Y	L	T	G
Template Known Secondary structure		T		T	T			.	T	T							.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	T					G	G	G	S			G	G	G	B		T	T	S		S	T	T	S	B							.	.	.	.	.								T	S	T	T	G	G
Template Predicted Secondary structure								.									.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.		.	.	.	.	.	.	.	20													.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90																											.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	F	K	V	F	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	A	W	S	R	L	F	P	Q	G	D	E	I	T	P	N	Q	Q	G	I	A	F	Y	R	S	V	F	E	E	C	K	K	Y	G	I	E	P	L	V	T	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		M	G	V	T	A	I	W	I	P	Q	P	V	E	N	I	Y	A	V	L	P	D	S	T	F	G	G	S	T	S	Y	H	G	Y	W	A	R	D	F	K	R	T	N	P	Y	F	G	S	.	.	.	.	.	.	.	F	T	D	F	Q	N	L	I	N	T	A	H	A	H	N	I	K	V	I	I	D	F
Template Known Secondary structure		G	T																				T	T	T					S	T	T	S		S									T	T	T			.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions