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Job DescriptionP24240
Confidence99.65%DateThu Jan 5 11:41:32 GMT 2012
Rank86Aligned Residues294
% Identity17%Templated2c0ha1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  FLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKV
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Template Conservation     
 
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Template Sequence  FLSGANQAWVNYARDFGHNQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YSKGKSTFESTLSDMQSHGGNS
Template Known Secondary structure 



SSTT
SSSTT
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   34.....40.........50... ......60.........70.....
 
   88.90 .........100.........110.........120.........130.........140......... 150.........160
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Query Sequence  FRT. . . . . SIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWR. . NRKLVEFFSRY
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Template Sequence  VRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKLQSYIDHA
Template Known Secondary structure  TTSSSS
TTS


TTTT

S


TT
T
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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   161........170. ........180.........190.........200......... 210.........220.........230...
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Query Sequence  ARTCFEAFDGL. . VKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQA. . . . . AHHQLVASALATKIAHEVNPQNQV
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Template Conservation        
  
 
 
  
   

                                                

  
   

Template Sequence  LKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMV
Template Known Secondary structure  TT
TT
GGGGB

S


SSGGG

GGGTTS
TTTT
S
B

TT

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   156...160.........170.........180.........190.........200.........210.........220.........230.....
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  GCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYAS
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Template Conservation              .....................                    .............    
    
 
  
Template Sequence  TVGSWNMKADTD. . . . . . . . . . . . . . . . . . . . . AMGFHNLYSDHCLVKAGGKQ. . . . . . . . . . . . . SGTLSFYQVHTYDW
Template Known Secondary structure  S
GGGB
S.....................STT

BTTS

T.............T


SS


B
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   236...240....... ..250.........260....... ..270.........280.
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  RCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRI
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Template Sequence  QNHFGNESPFKHSFS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NFRLKKPMVIGEFNQEHGAGM. . . . . . . . . . . .
Template Known Secondary structure  TTB

TT
TTSS
GG................................GG

SS


GGGSTT
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   282.......290...... ...300.........310.......
 
   394.....400.........410.........420...
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Query Sequence  SYLREHIRAMGEAIADGIPLMGYTTWGCID
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Template Sequence  . . . . SSESMFEWAYTKGY. . SGAWTWSRTD
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TT
..SS
SSS
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   318.320.........330. ........340.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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