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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank47Aligned Residues323
% Identity18%Templated1w32a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  ESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGF
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Template Sequence  ADFPIGVAVAASGGNADIFTSS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ARQNIVRAE. . FNQ
Template Known Secondary structure 
SS
B
SSSTTBTTT
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S
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   6...10.........20....... ..30...... ...
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  KVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYARTCF
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Template Sequence  ITAENIMKMSYMYSGS. NFSF. . . . . TNSDRLVSWAAQNGQTVHGHALVWHPSYQL. PNWASDSNANFRQDFARHIDTVA
Template Known Secondary structure  SSTTSGGGGTT.

.....TT



GGG
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TT
STT
TT
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Query Sequence  EAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGNFYPY
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Template Sequence  AHFAGQVKSWDVVNEALFDSADDPDGR. . GSANGYRQSVFYRQFGGPEYID. . EAFRRARAADPTAELYYNDFNTEENGA
Template Known Secondary structure  TTTT
S

B

GGG
TT

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TT

TST..
TTSSSTTS
S
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   113......120.........130......... 140.........150.........160. ........170.........180........
 
   246...250.........260.........270.........280.........290.........300.........310.........320.....
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Query Sequence  SCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNS
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Template Sequence  KTTALVN. . . . . . . . . . . . . . . . . . . . . . . . . LVQRLLNNGVP. . . . . . . . . . . . . . IDGVGFQMHV. . . . . . . . . . . . .
Template Known Secondary structure  .........................TT

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   189190..... ....200...... ...210......
 
   326...330.........340.........350.........360... ......370.........380......... 390.
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Query Sequence  SAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDR. YQKPLFLVENGLGAKDEFAANGEIND. . . . . . . . . . . . . DY
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Template Sequence  . . . . . . . . . . . . . . . . . . MNDYPSIANIRQAMQKIVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDR
Template Known Secondary structure  ..................SSSS
TT
SS
S

TTSS
SSS


SGGGGSS

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   217..220.........230.........240.........250.........260.........270........
 
   392.......400.........410.........420....... ..430.........440.........450.........460.......
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Query Sequence  RISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSA. . . STGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIA
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Template Sequence  QKARYKEIVQAYLEVVPPG. RRGGITVWGIADPDSWLYTHQN. LPDWPLLFNDNLQ. . . . . . . . . . PKPAYQGVVEALS
Template Known Secondary structure  S
TT.
S
SBGGGSTTSTT.


SSB
TTS
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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