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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank42Aligned Residues307
% Identity18%Templated1vbua1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  FPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEM
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Template Sequence  EKLNIYIGFAAINNFWSLSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AEKYMEVAR. . REF
Template Known Secondary structure  TT

TTGGGSTT................................................
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   524.....530.........540... ......550.. ...
 
   84.....90.........100.........110.........120......... 130.........140.........150.........160.
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Query Sequence  GFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPL. . VTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYA
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Template Sequence  NILTPENQMKWDTIHPERDRYNF. . . . . TPAEKHVEFAEENDMIVHGHTLVWHNQLPGWI. . TGREWTKEELLNVLEDHI
Template Known Secondary structure  SSSTTS

BTTB


.....TT

SSS

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   556...560.........570........ .580.........590.........600.........610 .........620........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  RTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGN
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Template Sequence  KTVVSHFKGRVKIWDVVNEAVSDSGTYRESV. . . . . . . . . . . . . . . WYKTIGPEYIEKAFRWAKEADPDAILIYNDYSIE
Template Known Secondary structure  TTTT

S
B
TTSSB


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T
TTSSS
S
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   629630.........640.........650......... 660.........670.........680.........690...
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  FYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMN
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Template Sequence  EINAKSNFVYNMIK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELKEKGVPVDGIGFQMHI. . . . . . . . .
Template Known Secondary structure  SSS.......................................TT





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   694.....700....... ..710.........720.....
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  ANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . DYRGLNYDSFRRNLERFA. KLGLQIYITEMDVRIPLSG. . . . . . SEEYYLKKQAEVCA
Template Known Secondary structure  ......................TT


.TTT
SSS......
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   726...730.........740... ......750.........760.. .......770......
 
   402.......410.........420.........430.... .....440.........450.........460........
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Query Sequence  AMGEAIADGIPLMGYTTWGCIDLVSASTGEMSK. . . RYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIAS
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Template Sequence  KIFDICLDNPAVKAIQFWGFTDKYSWVPG. FFKGYGKALLF. . . . . . . . . . DENYNPKPCYYAIKEVLEK
Template Known Secondary structure  TSTTS
SBTTS
S.STT

SSB..........
TTS
B
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   777..780.........790.........800..... ....810...... ...820.........830.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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