Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank36Aligned Residues302
% Identity16%Templated1v6ya_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  FPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEM
Query Conservation 

  
 

 



 



    

 
 
 

                               
 
 
  
 


 
   
Alig confidence 


















.................................................








..
Template Conservation        

 
         .................................................         ..
Template Sequence  AQSGRYFGTAIASGKLGDS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AYTTIASRE. . F
Template Known Secondary structure  TTT

GGGTT
...................................................
Template Predicted Secondary structure 






...................................................
Template SS confidence 















































































   10.........20........ .30....... .
 
   84.....90.........100.........110.........120....... ..130.........140.........150.........160.
Predicted Secondary structure 



















..









Query SS confidence 











































. .

































Query Sequence  GFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIE. . PLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYA
Query Conservation 
   




 



 
 
     
  

  
   
  
   

 ..




 




  
    


 
   
  
  

Alig confidence 






















.....















..













....















Template Conservation 
     
   
   

  
    .....   
  
      

 
           
 
 ....               
Template Sequence  NMVTAENEMKIDATEPQRGQFNF. . . . . SAGDRVYNWAVQNGKQVRGHTLAWHSQQPGWM. . . . QSLSGSTLRQAMIDHI
Template Known Secondary structure  SSSTTS
SBTTB


.....TT
SSS

....

Template Predicted Secondary structure 














.....









....


Template SS confidence 















































































   3940.........50.........60. ........70.........80.........90... ......100.........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  RTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGN
Query Conservation        




  
 




       
  
                     
 


 
            


      
Alig confidence 







































..............

























Template Conservation    
  

 
 
  


 


                    ..............    
   

  

 
          
Template Sequence  NGVMGHYKGKIAQWDVVNEAFSDDGSGGRRDSNLQRTGND. . . . . . . . . . . . . . WIEVAFRTARAADPAAKLCYNDYNIE
Template Known Secondary structure  TTT



B
SSSS

B


TTGGG
TT..............
TTSSS
S
Template Predicted Secondary structure 





















..............









Template SS confidence 















































































   110.........120.........130.........140......... 150.........160.........170.....
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  FYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMN
Query Conservation    
      
  

           
    
 

                   
   
    







    
     
Alig confidence 














......................................
















..........
Template Conservation                 ......................................     
   
 

    ..........
Template Sequence  NWTWAKTQGVYNMVR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DFKQRGVPIDCVGFQSH. . . . . . . . . .
Template Known Secondary structure  STTS......................................T





..........
Template Predicted Secondary structure 


......................................





..........
Template SS confidence 















































































   176...180.........190 .........200.......
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  ANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIR
Query Conservation                      
   
 
 
 

   
     

  

 




              
  
  

   
 
Alig confidence  ......................

















.

















.......













Template Conservation  ......................             
    .    

 


 
      .......        

    
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . LIVGQVPGDFRQNLQRFA. DLGVDVRITELDIRMRTP. . . . . . . SDATKLATQAADYK
Template Known Secondary structure  ......................TT


TT.TTT
SS.......

Template Predicted Secondary structure  ......................





.










.......

Template SS confidence 















































































   208.210.........220..... ....230.........240... ......250.......
 
   402.......410.........420....... ..430.........440.........450.........460........
Predicted Secondary structure 








...



















Query SS confidence 

























. . .








































Query Sequence  AMGEAIADGIPLMGYTTWGCIDLVSA. . . STGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIAS
Query Conservation      

 


 
 

  


 

 

...  
 
  



  

       
  
 

 

  
  

  
Alig confidence 

























...


.












..........













Template Conservation             
 
   
   
   
      .     

 
 
  ..........




 
    
  
Template Sequence  KVVQACMQVTRCQGVTVWGITDKYSWVPDVFP. GEGAALVWDASYA. . . . . . . . . . KKPAYAAVMEAFGS
Template Known Secondary structure  T
TTS
SBGGG
SST.T

SSB
TTS
..........B

Template Predicted Secondary structure 


















.










..........



Template SS confidence 





































































   258.260.........270.........280......... 290.........300.. .......310......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions