Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank29Aligned Residues429
% Identity26%Templated1uwsa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALM
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Template Sequence  MYSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMA. . . . . . . . . . AGLVSGDLPENGPGYWGNYKTFHDNA
Template Known Secondary structure 


TT


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SSTT




B
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GGGS

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   1........10.........20.........30.........40.... .....50.........60.........70
 
   81........90.........100.. .......110.........120.........130......
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Query Sequence  AEMGFKVFRTSIAWSRLFPQGD. . . . . . . . . . . . . . . . . . . . . . . . EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFD
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Template Sequence  QKMGLKIARLNVEWSRIFPNPLPRPFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWP
Template Known Secondary structure  TT





S






TT
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TT
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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   137..140..... ....150.........160.........170.........180.........190.........200......
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Query Sequence  VPMHLVTEY. . . . . . . . . . GSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVK
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Template Sequence  LPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELS
Template Known Secondary structure 
BTTTB
TT

SS
BGGGSTTT
S
T
GGG

TT



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   153......160.........170.........180.........190.........200.........210.........220.........230..
 
   207..210.........220.........230.........240.........250......... 260.........270.........280.....
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Query Sequence  YQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKD. RENLFFIDVQARGTYPAYSARVFREK
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Template Sequence  RRAMYNIIQAHARAYDGIKSVS. KKPVGIIYANSSFQPLT. . DKDMEAVEMAENDNRWWFFDAIIRGEITKIV. . . . . . .
Template Known Secondary structure  TT
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   233......240.........250.... .....260.........270. ........280.........290.........300..
 
   286...290.........300.........310.........320....... ..330.........340.........350.........360.
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Query Sequence  GVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSA. . . . ANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMY
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Template Sequence  . . . . . . . . . . RDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEGLYDVLTKYW
Template Known Secondary structure  ..........
TTTTT

S
SSS
TTSTTSS
SSSB
TTS
BB
TT

B

T
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   307..310.........320.........330.........340.........350.........360.........370......
 
   362.......370.........380.........390.........400.........410.........420.........430.........440.
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Query Sequence  DRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFV
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Template Sequence  NRYHLYMYVTENGIADD. . . . . . . . . ADYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASG. FSMRFGLLKV
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T.........T
SSTT

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SB



GGGG.GGS


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   377..380.........390... ......400.........410.........420.........430...... ...440......
 
   442.......450.........460.........470....
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Query Sequence  DRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE
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Template Sequence  DYN. . . . . TKRLYWRPSALVYREIATNGAITDE
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TT.....T


T
GG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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