Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence99.80%DateThu Jan 5 11:41:32 GMT 2012
Rank75Aligned Residues292
% Identity20%Templated1uhva2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80 .........90.........100.........110. ........120.........130.........140...
Predicted Secondary structure  .
















.....







...
Query SS confidence 







.






























. . . . .































. . .
Query Sequence  YKEDIALM. AEMGFKVFRTSIAWSRLFPQGDEITPNQQGI. . . . . AFYRSVFEECKKYGIEPLVTLCHFDVPMHLVT. . .
Query Conservation 
 


 
 .  

   




 



 
 
     
  

.....  
   
  
   

 




 




  
  ...
Alig confidence 







.






























.....






















..






...
Template Conservation      
       
   

                        
 
   
  

     

   
 
  .. 
        
Template Sequence  YIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFTYIDRIFDSFLEIGIRPFVEIGF. . MPKKLASGTQ
Template Known Secondary structure  TTS



S
TTSTTT

TT

T



..

TTTBSS

Template Predicted Secondary structure 






























..





Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100.. .......110..
 
   144.....150.........160.........170 .........180.........190.........200.........210.
Predicted Secondary structure  .....






.......























Query SS confidence  . . . . .


























. . . . . . .








































Query Sequence  . . . . . EYGSWRNRKLVEFFSRYARTCFEAFDG. . . . . . . LVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAH
Query Conservation  .....  


 
   
  
  

      


.......

  
 




       
  
                   
Alig confidence  .....
.
























.......






















..................
Template Conservation        .     
     
   
         


   
  
  





            ..................
Template Sequence  TVFYWE. GNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEK. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTT.
S
BS

TT

SS
TTSTTTSGGG
..................
Template Predicted Secondary structure 





.






















..................
Template SS confidence 















































































   113..... .120.........130.........140.........150.........160.........170...
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  HQLVASALATKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINK
Query Conservation    
 


 
            


        
      
  

           
    
 

                
Alig confidence 























................................















........
Template Conservation   
  
      


  

   
 
................................                ........
Template Sequence  EYFKLYKVTAKAIKEVNENLKVGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PAICGGADYWIEDFLN. . . . . . . .
Template Known Secondary structure 
TTS
................................
TT
T........
Template Predicted Secondary structure 




................................









........
Template SS confidence 















































































   174.....180.........190....... ..200.........210...
 
   292.......300.........310.........320.........330.........340.........350.........360... ..
Predicted Secondary structure 










































......
Query SS confidence 







































































. . . . . .

Query Sequence  APGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDR. . . . . . YQ
Query Conservation     
   
    







    
                         
   
 
 
 

   
     
......
 
Alig confidence  ...




























....................



















......

Template Conservation  ...         
    
 
            ....................                            
Template Sequence  . . . FCYEENVPVDFVSRHAYTSKQGEYTPHLI. . . . . . . . . . . . . . . . . . . . YQEIMPSEYMLNEFKTVREIIKNSHFPN
Template Known Secondary structure  ...T


S
B





SS

....................


B

TSS
TT
Template Predicted Secondary structure  ...



















....................










Template SS confidence 















































































   214.....220.........230.........240.. .......250.........260.........270
 
   366...370.........380.........390.........400.........410.........420......... 430.........440..
Predicted Secondary structure 




























...






Query SS confidence 































































. . .












Query Sequence  KPLFLVENGLGAKDEFAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSAST. . . GEMSKRYGFVFVD
Query Conservation   

 




              
  
  

   
     

 


 
 

  


 

 

  ...
 
  



  

Alig confidence 














.......
























..














...












Template Conservation   

 


 
      .......        

  
            ..    
   
               



   
Template Sequence  LPFHITEYNTSYSPQ. . . . . . . NPVHDTPFNAAYIARILSEGGDYVD. . SFSYWTFSDVFEERDVPRSQFHGGFGLVALN
Template Known Secondary structure 

S
S
TT.......
GGGGSGGGT
S..S
SBS


TTSS

SS
S

S
STT
Template Predicted Secondary structure 










.......








..


















Template SS confidence 















































































   271........280..... ....290.........300.........310 .........320.........330.........340.
 
   443......450.........460.......
Predicted Secondary structure 










Query SS confidence 
























Query Sequence  RDDAGNGTLTRTRKKSFWWYKKVIA
Query Conservation         
  
 

 

  
  

 
Alig confidence 

..........












Template Conservation 
 ..........




 
   
  
Template Sequence  MI. . . . . . . . . . PKPTFYTFKFFNA
Template Known Secondary structure  T..........
TT
Template Predicted Secondary structure 

..........


Template SS confidence 
























   342. ......350......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions