Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank2Aligned Residues446
% Identity34%Templated1qoxa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution2.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  MSVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALM
Query Conservation 
  

  
 

 



 



    

 
 
 

                               
 
 
  
 


 
 
Alig confidence 











































..............





















Template Conservation     

  



 



 
 


    
   
 

          ..............       
 
 
  
 


 
 
Template Sequence  IHMFPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTPGKVK. . . . . . . . . . . . . . NGDNGNVACDSYHRVEEDVQLL
Template Known Secondary structure 

TT





TTSTT


BSTTTSG..............GG

TTTTT
TTS
Template Predicted Secondary structure 

































..............










Template SS confidence 















































































   3......10.........20.........30.........40...... ...50.........60........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  AEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
Query Conservation    

   




 



 
 
     
  

  
   
  
   

 




 




  
    


 
   
  
  
Alig confidence 




















.









































.














Template Conservation    

   




 



 
 
. 
  
  

  
   

 
   

 




 


 
  
   .


     
  
  
Template Sequence  KDLGVKVYRFSISWPRVLPQG. TGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQ. GGWGSRITIDAFAEY
Template Known Secondary structure  T
S

STTS.SSS

TT
SS

BTT.TGGGST
Template Predicted Secondary structure 










.














.




Template SS confidence 















































































   6970.........80......... 90.........100.........110.........120.........130. ........140......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG
Query Conservation 
      




  
 




       
  
                     
 


 
            


     
Alig confidence 































..













































Template Conservation 
  
   


 
  
 
 


      

  
..   
               
 


 
            


     
Template Sequence  AELMFKELGGKIKQWITFNEPWCMAFLSNYLG. . VHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGIAPNTS
Template Known Secondary structure  TTT


TS
..SSTT



TT

S



Template Predicted Secondary structure 













..














Template SS confidence 















































































   147..150.........160.........170........ .180.........190.........200.........210.........220....
 
   241........250.........260. ........270.........280.........290.........300.........310.........
Predicted Secondary structure 




.


































Query SS confidence 




















.

























































Query Sequence  NFYPYSCKPEDVWAALEKDRE. NLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAE
Query Conservation     
      
  

      .     
    
 

                   
   
    







    
   
Alig confidence 




















.

























































Template Conservation     
      
  

          
 
    
 

             
     
   

   







    
   
Template Sequence  WAVPYRRTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYKPPIVDGDMELIHQPIDFIGINYYTSSMNRYN
Template Known Secondary structure  SSS
TTTTSS

T





TT



S
S

Template Predicted Secondary structure 




























Template SS confidence 















































































   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   320.........330.........340.........350.........360....... ..370.........380.........390........
Predicted Secondary structure 





























.















Query SS confidence 















































.






























Query Sequence  MNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKP. LFLVENGLGAKDEFAANGEINDDYRISYLRE
Query Conservation                        
   
 
 
 

   
     

  
.
 




              
  
  

  
Alig confidence 







...




































.






























Template Conservation          ...           
  

 
 
 

   
      
  


 




    
       
 
  

 

  
Template Sequence  PGEAGGML. . . SSEAISMGAPKTDIGWEIYAEGLYDLLRYTADKYGNPTLYITENGACYNDGLSLDGRIHDQRRIDYLAM
Template Known Secondary structure  SSGGGTTT...T





B
TTS
B

TTTS











TTSS


Template Predicted Secondary structure 







...



































Template SS confidence 















































































   305....310.. .......320.........330.........340.........350.........360.........370.........380.
 
   399400.........410.........420.........430.........440.........450.........460.........470...
Predicted Secondary structure 

































Query SS confidence 










































































Query Sequence  HIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDL
Query Conservation   
     

 


 
 

  


 

 

  
 
  



  

       
  
 

 

  
  

  

   
Alig confidence 































.












.....























Template Conservation 

     

 


 
 

  


 

 

  
.
  



  

  .....   
 

 
   
  

   
  
Template Sequence  HLIQASRAIEDGINLKGYMEWSLMDNFEWAEG. YGMRFGLVHVDYD. . . . . TLVRTPKDSFYWYKGVISRGWLDL
Template Known Secondary structure  TT


SB



GGGT.TSS


STT.....TT
S
Template Predicted Secondary structure 









.







.....








Template SS confidence 










































































   382.......390.........400.........410... ......420...... ...430.........440.........450
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions