 |
Job Description | P24240 | Confidence | 42.43% | Date | Thu Jan 5 11:41:32 GMT 2012 |
Rank | 280 | Aligned Residues | 56 |
% Identity | 14% | Template | d1m53a2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 2.20 |
|
 |
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | H | R | Y | K | E | D | I | A | L | M | A | E | M | G | F | K | V | F | R | T | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | A | W | S | R | L | F | P | Q | G | D | E | I | T | P | N | Q | Q | G | I | A | F | Y | R | S | V | F | E | E | C | K | K | Y | G | I | E | P | L | V | T | L |
Query Conservation |   |
|   |   |
|   |
|
|
|   |
|   |   |   |
|
|   |   |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |
|
| . | . | . | . | . | . | . |   |   |
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|
|   |
Template Sequence |   |
I | R | G | I | I | E | K | L | D | Y | L | K | S | L | G | I | D | A | I | W | I | N | P | H | Y | D | S | P | N | T | D | N | G | Y | D | I | S | N | Y | R | Q | I | M | K | E | Y | G | T | . |
. |
. |
. |
. |
. |
. |
M | E | D | F | D | S | L | V | A | E | M | K | K | R | N | M | R | L | M | I | D | V |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
|  |  |
|
|
| T | T | T | T | S | S |
| S |  |  |  |  |  |
| G | G | G |
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|