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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank9Aligned Residues441
% Identity32%Templated1gnxa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution1.68

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAE
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Template Sequence  TFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVR. . . . . . . . . . . . . . NGDTGDVATDHYHRWREDVALMAE
Template Known Secondary structure 

TT





TTSTT


BTSTTSSG..............GG

SSSTT
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   17..20.........30.........40.........50........ .60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  MGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYAR
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Template Sequence  LGLGAYRFSLAWPRIQPTG. RGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENA. GGWPERATAERFAEYAA
Template Known Secondary structure  TT
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SGGG.SSS

TT
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BT.T
TTST
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   83......90.........100. ........110.........120.........130.........140... ......150.........160
 
   163......170.........180.........190.........200.........210.........220.........230 .........240.
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Query Sequence  TCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQ. NQVGCMLAGGN
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Template Sequence  IAADALGDRVKTWTTLNEPWCSAFLGYGSG. . VHAPGRTDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHH
Template Known Secondary structure  TTT


TS
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   161........170.........180.........190 .........200.........210.........220.........230........
 
   242.......250......... 260.........270.........280.........290.........300.........310.........320
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Query Sequence  FYPYSCKPEDVWAALEKD. RENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEM
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Template Sequence  VRPLTDSDADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAHQKLDFLGVNYYSPTLVSAHS
Template Known Secondary structure  SSS
TSS

TTTT


TTS
TT



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   239240.........250.........260.........270.........280.........290.........300.........310........
 
   321........330.........340.........350.........360.... .....370.........380.........390.........
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Query Sequence  NANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRY. QKPLFLVENGLGAKDEFAANGEINDDYRISYLREH
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Template Sequence  PWPGADRVAF. . . . HQPPGETTAMGWAVDPSGLYELLRRLSSDFPALPLVITENGAAFHDYADPEGNVNDPERIAYVRDH
Template Known Secondary structure  SSTT
TT

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SS
B
TT

B


TTS









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   335....340.... .....350.........360.........370.........380.........390.........400.........410
 
   400.........410.........420.........430.........440.........450.........460.........470.
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Query Sequence  IRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGE
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Template Sequence  LAAVHRAIKDGSDVRGYFLWSLLDNFEWAHG. YSKRFGAVYVDYP. . . . . TGTRIPKASARWYAEVARTGVL
Template Known Secondary structure  TT


SB



GGGG.GG



STT.....TT

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   411........420.........430.........440. ........450.... .....460.........470......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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