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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank38Aligned Residues296
% Identity17%Templated1fh9a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.72

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  ESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGF
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Template Sequence  AGRDFGFALDPNRLSEA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QYKAIA. . DSEFNL
Template Known Secondary structure  TT

GGGGGS...................................................
S
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   11........20....... ..30... ......
 
   86...90.........100.........110.........120.........130 .........140.........150.........160...
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Query Sequence  KVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLV. . TLCHFDVPMHLVTEYGSWRNRKLVEFFSRYART
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Template Sequence  VVAENAMKWDATEPSQNSFSF. . . . . GAGDRVASYAADTGKELYGHTLVWHSQLPDWA. . . . KNLNGSAFESAMVNHVTK
Template Known Secondary structure  SSTTS
SBTTB


.....T
SSS

....T

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   40.........50.........60 .........70.........80.........90.. .......100.........110
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  CFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGNFY
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Template Sequence  VADHFEGKVASWDVVNEAFADGGGRRQDS. . . . . . . . . . . . . . AFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEGI
Template Known Secondary structure  TTTT



B
TTSSB
SS
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TT
SSSSS
SSS
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   111........120.........130......... 140.........150.........160.........170......
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  PYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMNAN
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Template Sequence  NAKSNSLYDLVKDFKAR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVPLDCVGFQSH. . . . . . . . . . . .
Template Known Secondary structure  S.......................................T





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   177..180.........190... ......200.....
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  NSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIRAM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . LIVGQVPGDFRQNLQRFA. DLGVDVRITELDIRMRTP. . . . . . . SDATKLATQAADYKKV
Template Known Secondary structure  ....................TT


TT.TTT
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   206...210.........220... ......230.........240. ........250.......
 
   404.....410.........420.........430.... .....440.........450.........460.....
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Query Sequence  GEAIADGIPLMGYTTWGCIDLVSASTGEMSK. . . RYGFVFVDRDDAGNGTLTRTRKKSFWWYKKV
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Template Sequence  VQACMQVTRCQGVTVWGITDKYSWVPD. VFPGEGAALVWDASYA. . . . . . . . . . KKPAYAAVMEA
Template Known Secondary structure  TSTTS
SBTTT
S.STT

SSB
TTS
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   258.260.........270.........280.... .....290.........300 .........310.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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