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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank16Aligned Residues442
% Identity28%Templated1e4mm_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMA
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Template Sequence  SSFSSDFIFGVASSAYQIEGTI. . . GRGLNIWDGFTHRYPNKSGP. . . . . . . . . . . . DHGNGDTTCDSFSYWQKDIDVLD
Template Known Secondary structure  GGS
TT


S
ST...TS

BS
T............T


SSSTT
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   23......30.........40.... .....50.........60.... .....70.........80.......
 
   82.......90.........100.. .......110.........120.........130.........140.........150.........160
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Query Sequence  EMGFKVFRTSIAWSRLFPQGD. EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
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Template Sequence  ELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDY
Template Known Secondary structure  T
S


TTSSGGG


TT
SS

B
GGGST
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   161........170.........180.........190.........200 .........210.........220......
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Query Sequence  ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGE. . . . . . . . . . . . NQDQVKYQAAHHQLVASALATKIAHE. .
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Template Sequence  ADLCFEEFGDSVKYWLTINQLYSVPTRGYGSA. . LDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY
Template Known Secondary structure  TTT

S
TTTS
..SSTT



TTT
TT
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TTTS
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   168.170.........180.........190......... 200.........210.........220.........230.........240.....
 
   227..230.........240.........250 ......... 260.........270.........280.........290.........300....
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Query Sequence  VNPQNQVGCMLAGGNFYPYSCKPE. DVWAALEKD. RENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVD
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Template Sequence  THQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGER. . LPSFSPEESNLVKGSYD
Template Known Secondary structure  GGG


SSTT
TSS

GGG..S



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   246...250.........260.........270.........280.........290.........300...... ...310.........320...
 
   305....310.........320.........330... ......340.........350.........360.......
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Query Sequence  FVSFSYYASRCASAEMNANNSSAANVVKS. . . . . . . . . . . . . . . . . LRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKP
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Template Sequence  FLGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNP
Template Known Secondary structure  S



TTSTT

GGGGG
SB
TTS
B
SS

SS
GGG


TTTS
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   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   368.370.........380.........390.........400........ .410.........420.........430.........440.....
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Query Sequence  . LFLVENGLGAKDEFAANGEINDDYRISYLREHIRAMGEAIA. DGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDD
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Template Sequence  LIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKG. FTVRFGLSYIDWNN
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TTS






SB


BTTTB.TS

STT
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   404.....410.........420.........430.........440.........450.........460........ .470.........480..
 
   446...450.........460.......
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Query Sequence  AGNGTLTRTRKKSFWWYKKVIA
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Template Sequence  . . . . VTDRDLKKSGQWYQSFIS
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   483......490.........500
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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