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Job DescriptionP24240
Confidence99.95%DateThu Jan 5 11:41:32 GMT 2012
Rank53Aligned Residues287
% Identity17%Templated1bg4a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10 .........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  ESFLW. GGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMG
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Template Sequence  HGKKYLGTIGDQYTLTKNT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KNPAIIK. . ADFG
Template Known Secondary structure  TT
S
S
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   13......20.........30. ....... .40..
 
   85....90.........100.........110.........120........ .130.........140.........150.........160..
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Query Sequence  FKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEP. . LVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYAR
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Template Sequence  QLTPENSMKWDATEPNRGQFTF. . . . . SGSDYLVNFAQSNGKLIRGHTLVWHSQLPGWVS. . . SITDKNTLISVLKNHIT
Template Known Secondary structure  SSTTS
SBTTB


.....TT

SSS

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   43......50.........60.... .....70.........80.........90....... ..100.........110....
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  TCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGNF
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Template Sequence  TVMTRYKGKIYAWDVLNEIF. . . . . . NEDGSLRNSVFYNVIGEDYVR. . . . . . . . . IAFETARSVDPNAKLYINDYNLDS
Template Known Secondary structure  TTTT
SS
B......
TTSSB


T
T.........
TTSS


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   115....120.........130.... .....140.........150..... ....160.........170.........
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  YPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMNA
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Template Sequence  AGYSKVNGMVSHVK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KWLAAGIPIDGIGSQTH. . . . . . . . . . .
Template Known Secondary structure  TT
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   180.........190... ......200.........210
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  NNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISYLREHIRA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . LGAGAGSAVAGALNALASAGTKEIAITELDIAGAS. . . . . . . . . . . . . . . . . STDYVN
Template Known Secondary structure  ......................
TT
GGGTT

STT

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   211........220.........230.........240..... ....250.
 
   403......410.........420.........430.........440.........450.........460......
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Query Sequence  MGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVI
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Template Sequence  VVNACLNQAKCVGITVWGVADPDSWRSS. . . SSPLLFDGNYN. . . . . . . . . . PKAAYNAIANAL
Template Known Secondary structure  T
TTS
SBGGG
TTGG...G

SSB
TTS
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   252.......260.........270......... 280.........290 .........300..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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