Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence95.31%DateThu Jan 5 11:41:32 GMT 2012
Rank152Aligned Residues100
% Identity13%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90 .........100.........110.........120..
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Query Sequence  YHRYKEDIALMAEMGFKVFRT. . . . . . . . . . . . . . . . . . . . . . . . . . . SIAWSRLFPQGDEITPNQQGIAFYRSVFEECK
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Template Sequence  YYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFH
Template Known Secondary structure  TT

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S

STT
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   204.....210.........220.........230.........240.........250.........260.........270.........280...
 
   123......130.. .. .....140...... ...150.........160....
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Query Sequence  KYGIEPLVTL. . CH. . . . . . . . . . . . . . . . . . . . . . FDVPMHLVTEYG. . . . . . . . . . . . . . SWRNRKLVEFFSRYARTC
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Template Sequence  NAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYW
Template Known Secondary structure  TT


SS
TT
SBSSSS
SS
B

SSB
B
TTSSSB

SSSSS

B
TTS
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   284.....290.........300.........310.........320.........330.........340.........350.........360...
 
   165....
Predicted Secondary structure 
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Query Sequence  FEAFD
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Template Conservation      
Template Sequence  ANTMG
Template Known Secondary structure  TS
Template Predicted Secondary structure 

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   364....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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