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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank4Aligned Residues465
% Identity49%Templatec3qomA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:6-phospho-beta-glucosidase; PDBTitle: crystal structure of 6-phospho-beta-glucosidase from lactobacillus2 plantarum
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMA
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Template Sequence  RAFPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIXTLGTNERP. . . . REITDGVVAGKYYPNHQAIDFYHRYPEDIELFA
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TT





TTGGG


BGGGGB



SSS
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B
SS

TT


TTTTTT
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   6...10.........20.........30.........40........ .50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYA
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Template Sequence  EXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFA
Template Known Secondary structure  T
S

SSSS

SS

TT
SS

B
GGGST
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.. .......200.........210.........220.........230......
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Query Sequence  RTCFEAFDGLVKYWLTFNEINIMLHSPFSGA. . . . . GLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCM
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Template Sequence  KVCFERYRDKVTYWXTFNEINNQTNFESDGAXLTDSGIIHQPGENRERWXYQAAHYELVASAAAVQLGHQINPDFQIGCX
Template Known Secondary structure  TTTT

TTGGGGGSTT





TT


TT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   237..240.........250.........260.........270.........280.........290.........300 .........310.....
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Query Sequence  LAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILK. NTVDFVSFSYYASRC
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Template Sequence  IAXCPIYPLTAAPADVLFAQRAXQTRFYFADVHCNGTYPQWLRNRFESEHFNLDITAEDLKILQAGTVDYIGFSYYXSFT
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SSS
SS

TT








SS

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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  ASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYRISY
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Template Sequence  VKDTGKLAYNEEHDLV. . . KNPYVKASDWGWQVDPVGLRYAXNWFTDRYHLPLFIVENGLGAIDKKTADNQIHDDYRIDY
Template Known Secondary structure 


SSS


TTTS...

TTS
B
TTS
B

S





B


B
TTS
B

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   322.......330....... ..340.........350.........360.........370.........380.........390........
 
   396...400....... ..410.........420.........430.. .......440.........450.........460.........470...
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Query Sequence  LREHIRAMGEAI. ADGIPLMGYTTWGCIDLVSASTGEM. SKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDL
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Template Sequence  LTDHLRQIKLAVLEDGVDLIGYTPWGCIDLVAASTG. QXSKRYGFIYVDENDDGSGSLKRYKKDSFTWFQHVIATNGAEI
Template Known Secondary structure  TT




BTSB



TTT
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SSSB

S


TTS
S



TTTTT
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   399400.........410.........420.........430.... .....440.........450.........460.........470.......
 
   474
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Query Sequence  E
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Template Sequence  E
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   478
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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