Job Description P24240 Confidence 99.86% Date Thu Jan 5 11:41:32 GMT 2012 Rank 65 Aligned Residues 306 % Identity 16% Template c3pzqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:mannan endo-1,4-beta-mannosidase. glycosyl hydrolase family PDBTitle: structure of the hyperthermostable endo-1,4-beta-d-mannanase from2 thermotoga petrophila rku-1 with maltose and glycerol Resolution 1.92 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90											.	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Query Sequence		D	F	Y	H	R	Y	K	E	D	I	A	L	M	A	E	M	G	F	K	V	F	R	T	.	.	.	.	.	.	.	.	.	.	S	I	A	W	S	R	L	F	P	Q	G	D	E	I	T	.	.	.	.	.	.	P	N	Q	Q	G	I	A	F	Y	R	S	V	F	E	E	C	K	K	Y	G	I	E	P	L	V	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	N	R	M	I	D	S	V	L	E	S	A	R	D	M	G	I	K	V	L	R	I	W	G	F	L	D	G	E	S	Y	C	R	D	K	N	T	Y	M	H	P	E	P	G	V	F	G	V	P	E	G	I	S	N	A	Q	N	G	F	E	R	L	D	Y	T	I	A	K	A	K	E	L	G	I	K	L	I	I	V
Template Known Secondary structure		S																T											B	S								T			S	B	S	B	T	T	B		S	S		T	T			S																			T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.											.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		L	C	H	F	D	V	P	M	H	L	V	T	E	Y	G	S	W	.	.	.	.	.	.	.	.	.	.	R	N	R	K	L	V	E	F	F	S	R	Y	A	R	T	C	F	E	A	F	D	G	L	V	K	Y	.	.	.	.	.	.	.	.	.	.	W	L	T	F	N	E	I	N	I	M	L	H	S	P	F	S	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																																																	.
Template Sequence		L	V	N	N	W	D	D	F	G	G	M	N	Q	Y	V	R	W	F	G	G	T	H	H	D	D	F	Y	R	D	E	R	I	K	E	E	Y	K	K	Y	V	S	F	L	I	N	H	V	N	V	Y	T	G	V	P	Y	R	E	E	P	T	I	M	A	W	E	L	A	N	E	L	R	C	E	T	D	K	S	G	N	.
Template Known Secondary structure				B	S	S	S	T	T	S									T	T		S	S	G	G	G	G	G	T																			B		T	T	T			B	G	G	G		T	T						S		B	T				T	T		T	T	S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	V	F	E	E	G	E	N	Q	D	Q	V	K	Y	Q	A	A	H	H	Q	L	V	A	S	A	L	A	T	K	I	A	H	E	V	N	P	Q	N	Q	V	G	C	M	L	A	G	G	N	F	Y	P	Y	S	C	K	P	E	D	V	W	A	A	L	E	K	D	R	E	N	L	F	F	I	D	V	Q	A	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	V	E	W	V	K	E	M	S	S	Y	I	K	S	L	D	P	N	H	L	V	A	V	G	D	E	G	F	F	S	N	Y	E	G	F	K	P	Y	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	W	A	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		S	S	S											B			T	T				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.		S	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.														250	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	Y	P	A	Y	S	A	R	V	F	R	E	K	G	V	T	I	N	K	A	P	G	D	D	E	I	L	K	N	T	V	D	F	V	S	F	S	Y	Y	A	S	R	C	A	S	A	E	M	N	A	N	N	S	S	A	A	N	V	V	K	S	L	R	N	P	Y	L	Q	V	S	D	W	G	W	G	I	D	P	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	W	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	W	K	K	L	L	S	I	E	T	V	D	F	G	T	F	H	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	H	W	G	V	S	P	E	N	Y	A	Q	W	G	A
Template Known Secondary structure		B	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T		T	T			S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T			G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260																.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																									.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	R	I	T	M	N	M	M	Y	D	R	Y	Q	K	P	L	F	L	V	E	N	G	L	G	A	K	D	E	F	A	A	N	G	E	I	N	D	D	Y	R	I	S	Y	L	R	E	H	I	R	A	M	G	E	A	I	A	D	G	I	P	L	M	G	Y	T	T	W	G	C	I	D	L	V	S	A	S	T	G	E
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.																				.
Template Conservation																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.																				.
Template Sequence		K	W	I	E	D	H	I	K	I	A	K	E	I	G	K	P	V	V	L	E	E	Y	G	I	P	K	S	.	.	.	.	.	.	.	.	.	A	P	V	N	R	T	A	I	Y	R	L	W	N	D	L	V	Y	D	L	.	.	.	.	.	G	G	D	G	A	M	F	W	M	L	A	G	I	G	E	G	S	D	R	.
Template Known Secondary structure															T												T	T	.	.	.	.	.	.	.	.	.	S	S	S																	.	.	.	.	.	T		S					S		B			B		B	T	T	B		.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.																				.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.										.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.						.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	R	Y	G	F	V	F	V	D	R	D	D	A	G	N	G	T	L	T	R	T	R	K	K	S	F	W	W	Y	K	K	V	I	A
Query Conservation
Alig confidence		.	.							.	.	.	.
Template Conservation		.	.							.	.	.	.
Template Sequence		.	.	D	E	R	G	Y	Y	.	.	.	.	P	D	Y	D	G	F	R	I	V	N	D	D	S	P	E	A	E	L	I	R	E	Y	A	K
Template Known Secondary structure		.	.		T	T	S	B		.	.	.	.			S	S	S			B		S	S	S	S
Template Predicted Secondary structure		.	.							.	.	.	.
Template SS confidence
				362	.	.	.	.	.					.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions