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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank13Aligned Residues442
% Identity32%Templatec3gnoA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:os03g0212800 protein; PDBTitle: crystal structure of a rice os3bglu6 beta-glucosidase
Resolution1.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAE
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Template Sequence  SFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKIT. . . . . . . . . . . . . . DFSNADVAVDQYHRFEEDIQLMAD
Template Known Secondary structure  GS
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TTSTT


BTSTTSST..............TS


SSTT
T
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   16...20.........30.........40.........50....... ..60.........70.........80.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  MGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYAR
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Template Sequence  MGMDAYRFSIAWSRIYPNG. VGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDKYKGWLDRQIVDDFAAYAE
Template Known Secondary structure  TT
S


TTS.SSS

TT
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B
GGGST
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   82.......90.........100 .........110.........120.........130.........140.........150.........160
 
   163......170.........180.........190.........200... ......210.........220...... .
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Query Sequence  TCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQD. . . . . . . . . . . . QVKYQAAHHQLVASALATKIAHE. . . V
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Template Sequence  TCFREFGDRVKHWITLNEPHTVAIQGYDAG. . LQAPGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKA
Template Known Secondary structure  TTT


TS
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TTT
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TTTT
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   161........170.........180.........190 .........200.........210.........220.........230........
 
   228.230.........240.........250......... 260.........270.........280.........290.........300......
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Query Sequence  NPQNQVGCMLAGGNFYPYSCKPEDVWAALEKD. RENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFV
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Template Sequence  TQNGQLGIAFDVMWFEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGER. . LPRFTADEAAVVKGALDFV
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   239240.........250.........260.........270.........280.........290....... ..300.........310......
 
   307..310.........320......... 330.........340.........350.........360...... ...370....
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Query Sequence  SFSYYASRCASAEMNANNSSAAN. . . . . . . . . . . VVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQK. PLFLVENG
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Template Sequence  GINHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPRGMRSLMNYVKERYNSPPVYITENG
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SSS




TSTTSS
B
SSTT
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TTS


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   317..320.........330.........340.........350.........360.........370.........380.........390......
 
   375....380 .........390.........400......... 410.........420.........430.........440.........450.
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Query Sequence  LGAKDE. . FAANGEINDDYRISYLREHIRAMGEAIAD. GIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTL
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Template Sequence  MDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKEDGCDVRGYFAWSLLDNWEWAAG. YSSRFGLYFVDYKD. . . . NL
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TTS
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GGGG.GG

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   397..400.........410.........420.........430.........440.........450..... ....460......... 470.
 
   452.......460........
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Query Sequence  TRTRKKSFWWYKKVIAS
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Template Sequence  KRYPKNSVQWFKALLKT
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   472.......480........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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