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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank6Aligned Residues438
% Identity33%Templatec3fiyA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of bglb
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMA
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Template Sequence  KKFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIK. . . . . . . . . . . . . . NGDSGDVACDHYHRYEQDLDLMR
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TT





TT
TT


BTTSTTSSG..............GG

SSSTT
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   41........50.........60.........70.........80... ......90.........100......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYA
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Template Sequence  QLGLKTYRFSIAWARIQPDS. SRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWVEDE. GGWLSRESASRFAEYT
Template Known Secondary structure  T
S



ST.T



TT
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BT.TGGGST
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   107..110.........120...... ...130.........140.........150.........160........ .170.........180....
 
   162.......170.........180.........190.........200.........210.........220.........230. ........240
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Query Sequence  RTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQN. QVGCMLAGG
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Template Sequence  HALVAALGDQIPLWVTHNEPMVTVWAGYHMG. . LFAPGLKDPTLGGRVAHHLLLSHGQALQAFRALSPAGSQMGITLNFN
Template Known Secondary structure  GGG
S
TS
..SSTT



GGG

TT

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   185....190.........200.........210..... ....220.........230.........240.........250.........260..
 
   241........250......... 260.........270.........280.........290.........300.........310.........
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Query Sequence  NFYPYSCKPEDVWAALEKD. RENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAE
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Template Sequence  TIYPVSAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAY. . PNLPEFIAPEDMQTISAPIDFLGVNYYNPMRVKSS
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SSS
TTSS

S..TTGGGG

TTTS

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   263......270.........280.........290.........300..... ....310.........320.........330.........340
 
   320.........330.........340.........350.........360.... .....370.........380.........390........
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Query Sequence  MNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRY. QKPLFLVENGLGAKDEFAANGEINDDYRISYLRE
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Template Sequence  PQPP. . . . . . . GIEVVQVESPVTAMGWEIAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQG
Template Known Secondary structure  SSTT.......S


SSB
TT

B

T
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TTS
B

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   341... .....350.........360.........370.........380.........390.........400.........410...
 
   399400.........410.........420.........430.........440.........450.........460.........470..
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Query Sequence  HIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGED
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Template Sequence  HIGAARRALADGVDLRGYYAWSLLDNFEWAEG. YSKRFGIIYVDFE. . . . . TQQRTLKQSAQWYRDVIANNGLE
Template Known Secondary structure  TT


SB



GGGG.GG



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BTS

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   414.....420.........430.........440..... ....450........ .460.........470.........480.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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