Job Description P24240 Confidence 50.42% Date Thu Jan 5 11:41:32 GMT 2012 Rank 263 Aligned Residues 88 % Identity 15% Template c3dhuC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:alpha-amylase; PDBTitle: crystal structure of an alpha-amylase from lactobacillus2 plantarum Resolution 2.00 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	H	R	Y	K	E	D	I	A	L	M	A	E	M	G	F	K	V	F	R	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	W	S	R	L	F	P	Q	G	D	E	I	T	P	N	Q	Q	G	I	A	F	Y	R	S	V	F	E	E	C	K	K	Y	G	I	E	P	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.
Template Sequence		F	A	G	V	T	A	D	L	Q	R	I	K	D	L	G	T	D	I	L	W	L	L	P	I	N	P	I	G	E	V	N	R	K	G	T	L	G	S	P	Y	A	I	K	D	Y	R	G	I	N	P	E	Y	G	T	.	.	.	.	.	.	.	L	A	D	F	K	A	L	T	D	R	A	H	E	L	G	M	K	V	M
Template Known Secondary structure							T	T								T		S								S		B			T	T			T	T	T			T	T	S	B	S		T	T	S			G	G	G			.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	L	.	.	C	H	F	D	V	P	M	H	L	V	T	E	Y	G	S	W	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	K	L	V	E	F	F	S	R	Y	A	R	T	C
Query Conservation					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	I	V	Y	N	H	T	S	P	D	S	V	L	A	T	E	H	P	E	W	F	Y	H	D	A	D	G	Q	L	T	N	K	V	G	D	W	S	D	V	K	D	L	D	Y	G	H	H	E	L	W	Q	Y	Q	I	D	T	L	L	Y	W
Template Known Secondary structure							S				T	T	S							G	G	G	B		B		T	T	S		B			S		T	T		T	T				B		T	T		T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions