Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank17Aligned Residues449
% Identity29%Templatec3ai0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of beta-glucosidase from termite neotermes2 koshunensis in complex with para-nitrophenyl-beta-d-glucopyranoside
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  MSVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALM
Query Conservation 
  

  
 

 



 



    

 
 
 

                               
 
 
  
 


 
 
Alig confidence 







































.............


























Template Conservation     

  



 



 
 

     


 
 

      .............            
 
 
 

 


 
 
Template Sequence  VYTFPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEH. . . . . . . . . . . . . PDYVVDGATGDIADDSYHLYKEDVKIL
Template Known Secondary structure  TTB

TT





TTGGG


B
.............GGGSGGG

SSSTT
Template Predicted Secondary structure 























.............















Template SS confidence 















































































   28.30.........40.........50.........60....... ..70.........80.........90....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  AEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
Query Conservation    

   




 



 
 
     
  

  
   
  
   

 




 




  
    


 
   
  
  
Alig confidence 































































.














Template Conservation   


   




 



 
 
  
  
  

  
   

 
   

 




 


 
  
   .


 
   
  
  
Template Sequence  KELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDL. GGWPNLVLAKYSENY
Template Known Secondary structure  T
S

STTSSTT


TT
SS

BTT.TSTTST
Template Predicted Secondary structure 

























.




Template SS confidence 















































































   95....100.........110.........120.........130.........140.........150........ .160.........170...
 
   161........170.........180.........190.........200.........210.........220........ .230.......
Predicted Secondary structure 


























...



Query SS confidence 



































































. . .








Query Sequence  ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVN. . . PQNQVGCML
Query Conservation 
      




  
 




       
  
                     
 


 
        ...    


  
Alig confidence 
































.

































...








Template Conservation 
      


 
  


 


            .  
           
      


 
              



  
Template Sequence  ARVLFKNFGDRVKLWLTFNDPLTFMDGYASEIG. MAPSINTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISL
Template Known Secondary structure  TTT


GGGGB
TTS.STT

B
TTTT

Template Predicted Secondary structure 












.













Template SS confidence 















































































   174.....180.........190.........200...... ...210.........220.........230.........240.........250..
 
   238.240.........250......... 260.........270 .........280..... ....290.........300......
Predicted Secondary structure 







.






..





........













Query SS confidence 





















.










. .














. . . . . . . .




















Query Sequence  AGGNFYPYSCKPEDVWAALEKD. RENLFFIDVQA. . RGTYPAYSARVFREK. . . . . . . . GVTINKAPGDDEILKNTVDFV
Query Conservation        
      
  

    .       
   .. 
 

          ........         
   
    


Alig confidence 





















.










..














........




















Template Conservation        
      
  

            
 
    
 

      
             

          
   


Template Sequence  NINWCEPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEVEYIRGTHDFL
Template Known Secondary structure 

SSSSTSSS
SS
TT
SS
SS



TT

S
Template Predicted Secondary structure 







































Template SS confidence 















































































   253......260.........270.........280.........290.........300.........310.........320.........330..
 
   307..310.........320......... 330.........340...... ...350.........360.... .....370.........380..
Predicted Secondary structure 

















..















.
.












Query SS confidence 






















. .
















.

















.

















Query Sequence  SFSYYASRCASAEMNANNSSAAN. . VVKSLRNPYLQVSDWGW. GIDPLGLRITMNMMYDRY. QKPLFLVENGLGAKDEFA
Query Conservation 




    
             ..            
   
. 
 
 

   
     

.  

 




        
Alig confidence 






















..
















.

















.
















.
Template Conservation 




                                    
  
 
 

   
     

   

 




      
.
Template Sequence  GINFYTALLGKSGVEGYEPSRYRDSGVILTQDAAWPISASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYGGL.
Template Known Secondary structure 


SS

S
SS
T


TTS


SSTT



TS





BSS
S.
Template Predicted Secondary structure 

















































.
Template SS confidence 















































































   333......340.........350.........360.........370.........380.........390.........400.........410.
 
   383......390.........400....... ..410.........420.........430.........440.........450.........460.
Predicted Secondary structure 





.




























Query SS confidence 
























.





















































Query Sequence  ANGEINDDYRISYLREHIRAMGEAI. ADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWW
Query Conservation        
  
  

   
     

. 


 
 

  


 

 

  
 
  



  

       
  
 

 

  
Alig confidence  .....



















.






















.














...











Template Conservation  ..... 
  

 

  

  
  

  


 
 

  


 

 

  
.
  



  

  
 ...   
  
 

  
Template Sequence  . . . . . NDTGRVHYYTEHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRG. YSEKFGIYAVDFEDP. . . ARPRIPKESAKV
Template Known Secondary structure  .....

TT



SB



GGGT.TSSB

S
TTST...T


Template Predicted Secondary structure  .....









.









...



Template SS confidence 















































































   412.......420.........430.........440.........450..... ....460.........470 .........480..
 
   462.......470....
Predicted Secondary structure 





Query SS confidence 












Query Sequence  YKKVIASNGEDLE
Query Conservation 
  

  

    
Alig confidence 












Template Conservation 
  

        
Template Sequence  LAEIMNTRKIPER
Template Known Secondary structure  TB

GG
Template Predicted Secondary structure 



Template SS confidence 












   483......490.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions