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Job DescriptionP24240
Confidence58.56%DateThu Jan 5 11:41:32 GMT 2012
Rank241Aligned Residues166
% Identity9%Templatec2xvgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha xylosidase; PDBTitle: crystal structure of alpha-xylosidase (gh31) from2 cellvibrio japonicus
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.... .....90.........100.........110.........120.........130.........140.....
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Query Sequence  DFYHRYKEDIALMAEMG. . FKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEY
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Template Sequence  KSSDEIIQNLKEYRDRKIPIDNIVLDWSYWPEDAWG. SHDFDKQFFPDPKALVDKVHAMNAQIMISVWPKFYPTTDNYKE
Template Known Secondary structure 
STT




S

S
TT
TT.S



TTT
S
TT


S
TTS
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   445....450.........460.........470.........480 .........490.........500.........510.........520...
 
   146 ...150.........160.........170.........180.........190.......
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Query Sequence  G. . . . . . . . . . . . . . . . . . . . . . . . . . . . SWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFE
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Template Sequence  LNAKGFMFNRNLDEKNLDWIGKGYLNAFYDPFSPEATAIFWKQIRDKINVHGFDA. WWLDAVEPDIHSNLTFEKRKWLMT
Template Known Secondary structure  TT
TTT
B
SSTT

B


SSTGGGT

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TTT
SSTT

T
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   524.....530.........540.........550.........560.........570........ .580.........590.........600..
 
   198.200.........210.........220.........230......
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Query Sequence  EGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCM
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Template Sequence  PNARGNGAEIFNAYAVPHAEG. VYQGELATDGDKRSFIL
Template Known Secondary structure  SBTTB
SGGGTTTT.
TTB


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   603......610.........620... ......630.........640
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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