Job Description P24240 Confidence 86.62% Date Thu Jan 5 11:41:32 GMT 2012 Rank 181 Aligned Residues 135 % Identity 18% Template c2vcbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylglucosaminidase; PDBTitle: family 89 glycoside hydrolase from clostridium perfringens2 in complex with pugnac Resolution 2.20 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.																																.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	H	R	Y	K	E	D	I	A	L	M	A	E	M	G	F	K	V	F	R	T	S	I	.	.	.	.	A	W	S	R	L	F	P	Q	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	T	P	N	Q	Q	G	I	A	F
Query Conservation																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	D	Q	Y	E	E	F	L	D	W	C	A	M	N	G	V	N	L	V	L	D	I	I	G	Q	E	E	V	L	R	R	T	L	N	E	F	G	Y	S	D	E	E	V	K	E	F	I	S	G	P	A	Y	F	A	W	F	Y	M	Q	N	M	T	G	F	G	G	P	L	P	N	D	W	F	E	Q	R	A	E	L
Template Known Secondary structure																T	T								T	T										G	G	G	T										S			T	T							T	T	S			S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.																	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	S	V	F	E	E	C	K	K	Y	G	I	E	P	L	V	T	L	C	H	F	D	V	P	M	H	L	V	T	.	.	.	.	.	.	.	.	E	Y	G	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	R	K	L	V	E	F	F	S	R	Y	A	R	T	C	F	E	A	F	D
Query Conservation																																.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	K	M	H	D	R	M	Q	S	F	G	I	N	P	V	L	Q	G	Y	S	G	M	V	P	R	D	F	K	E	K	N	Q	E	A	Q	T	I	S	Q	G	G	W	C	G	F	D	R	P	D	M	L	K	T	Y	V	N	E	G	E	A	D	Y	F	Q	K	V	A	D	V	F	Y	E	K	Q	K	E	V	F	G
Template Known Secondary structure													T									S					T	T					S	T	T										T	T									S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	L	V	K	Y	W	L	T	F	N	E	I	N	I	M	L	H	S	P	F	S	G	A	G	L	V	F	E	E	G	E	N	Q	D	Q	V	K	Y	Q	A	A	H	H	Q	L	V	A	S
Query Conservation		.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	T	N	F	Y	G	V	D	P	F	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	T	G	D	L	D	N	G	K	I	Y	E	I	I	Q	N	K	M	I	E	H
Template Known Secondary structure		S			S						T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.															.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions