Job Description P24240 Confidence 90.22% Date Thu Jan 5 11:41:32 GMT 2012 Rank 164 Aligned Residues 128 % Identity 11% Template c2taaA_ PDB info PDB header:hydrolase (o-glycosyl) Chain: A: PDB Molecule:taka-amylase a; PDBTitle: structure and possible catalytic residues of taka-amylase a Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.														.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	R	E	G	D	K	G	L	T	T	V	D	M	I	P	H	G	E	H	R	M	A	V	K	L	G	L	E	K	R	F	Q	L	R	D	D	E	F	Y	P	S	H	E	A	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	H	R	Y	K	E	D	I	A	L	M	A	E	M	G	F	K	V	F
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	P	A	D	W	R	S	Q	S	I	Y	F	L	L	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	A	R	T	D	G	S	T	T	A	T	C	N	T	A	D	Q	K	Y	C	G	G	T	W	Q	G	I	I	D	K	L	D	Y	I	Q	G	M	G	F	T	A	I
Template Known Secondary structure				T	T	T	G	G	G	S							B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B			T	T			T	T					G	G	G		S						G	G	G	G	G	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.																					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.													.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.											.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.							.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.							.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	S	I	A	W	S	R	L	F	P	Q	G	D	E	.	.	.	.	.	.	.	.	.	.	.	.	I	T	P	N	Q	Q	.	.	G	I	A	F	Y	R	S	V	F	E	E	C	K	K	Y	G	I	E	P	L	V	T	L	.	.	.	.	.	.	.	.	.	.	C	H	F	D	V	P	M	H	L	V	T	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.							.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.							.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	I	T	P	V	T	A	Q	L	P	Q	D	C	A	Y	G	D	A	Y	T	G	Y	W	Q	T	D	I	Y	S	L	N	E	N	Y	G	T	A	D	D	L	K	A	L	S	S	A	L	H	E	R	G	M	Y	L	M	V	D	V	V	A	N	H	M	G	Y	D	G	A	G	S	S	V	D	Y	S	V	F	K	P	F
Template Known Secondary structure							S				S	S			T	T				T	T					S	S	S	S	S			S	S	S			T	T													S									T	T	B					S		G	G	G				S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		145	.	.																																			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R	N	R	K	L	V	E	F	F	S	R	Y	A	R	T	C	F	E	A	F	D
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	Q	D	Y	F	H	P	F	C	F	I	Q	N	Y	E	D	Q	T	Q	V	E	D	C	W	L	G	D	N	T	V	S	L	P	D	L	D	T	T	K	D	V	V	K	N	E	W	Y	D	W	V	G	S	L	V	S	N	Y	S
Template Known Secondary structure		S	S	S	T	T	B					B			S	G	G	G		S	S	T	T	T	S	B				T	T					B	B			S	S	S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions