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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank23Aligned Residues443
% Identity29%Templatec2jf7B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:strictosidine-o-beta-d-glucosidase; PDBTitle: structure of strictosidine glucosidase
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMA
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Template Sequence  RDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRS. . . . . . . . . . . . . PAKISDGSNGNQAINCYHMYKEDIKIMK
Template Known Secondary structure  GGS
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TTSTT


B
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SSSTT
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   41........50.........60.........70......... 80.........90.........100.......
 
   82.......90.........100.. .......110.........120.........130.........140.........150.........160
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Query Sequence  EMGFKVFRTSIAWSRLFPQGD. EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
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Template Sequence  QTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALEDEYGGFLSHRIVDDFCEY
Template Known Secondary structure  T
S

STTSSSTT


TT
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B
GGGSTT
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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   161........170.........180.........190.........200 .........210.........220...... ...230
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Query Sequence  ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGE. . . . . . . NQDQVKYQAAHHQLVASALATKIAHE. . . VNPQ
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Template Sequence  AEFCFWEFGDKIKYWTTFNEPHTFAVNGYALG. . EFAPGRGGKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQE
Template Known Secondary structure  GGG
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   188.190.........200.........210......... 220.........230.........240.........250.........260.....
 
   231........240.........250......... 260.........270.........280.........290.........300.........
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Query Sequence  NQVGCMLAGGNFYPYSCKPEDVWAALEKD. RENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFS
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Template Sequence  GEIGIVLNSMWMEPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRL. . PKFSADDSEKLKGCYDFIGMN
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GGGS..



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   266...270.........280.........290.........300.........310.........320.. .......330.........340...
 
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Query Sequence  YYASRCASAEMNA. . NNSSAANVVKSLRNPYLQVSDWGW. GIDPLGLRITMNMMYDRYQKP. LFLVENGLGAKDEFA. . A
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Template Sequence  YYTATYVTNAVLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLYKLLVYTKETYHVPVLYVTESGMVEENKTKILL
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S
SBSSS
BSS
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   344.....350.........360.........370.........380.........390.........400.........410.........420...
 
   384.....390.........400.........410.........420.........430.........440.........450.........460...
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Query Sequence  NGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYK
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Template Sequence  SEARRDAERTDYHQKHLASVRDAIDDGVNVKGYFVWSFFDNFEWNLG. YICRYGIIHVDYK. . . . . SFERYPKESAIWYK
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   430.........440.........450.........460.........470...... ...480......... 490.........500...
 
   464...
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Query Sequence  KVIA
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Template Sequence  NFIA
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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