Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank11Aligned Residues437
% Identity32%Templatec2j75A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-glucosidase a; PDBTitle: beta-glucosidase from thermotoga maritima in complex with2 noeuromycin
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  MSVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALM
Query Conservation 
  

  
 

 



 



    

 
 
 

                               
 
 
  
 


 
 
Alig confidence 











































..............





















Template Conservation     

  
 

 



 




    
   
 

          ..............       
 
 
  
 


 
 
Template Sequence  VKKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVK. . . . . . . . . . . . . . NGDTGDVACDHYNRWKEDIEII
Template Known Secondary structure 


TT





TTGGG


BTSTTSSG..............GG

SSSTT
Template Predicted Secondary structure 




























..............









Template SS confidence 















































































   3......10.........20.........30.........40...... ...50.........60........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  AEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
Query Conservation    

   




 



 
 
     
  

  
   
  
   

 




 




  
    


 
   
  
  
Alig confidence 




















.









































.














Template Conservation    

   




 



 
 
. 
  
  

  
   

 
   

 




 
 
 
  
   .


     
  
  
Template Sequence  EKLGVKAYRFSISWPRILPEG. TGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK. GGWANREIADWFAEY
Template Known Secondary structure  TT



STTS.SS


TT
SS

BTT.TGGGSTT
Template Predicted Secondary structure 












.













.




Template SS confidence 















































































   6970.........80......... 90.........100.........110.........120.........130. ........140......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG
Query Conservation 
      




  
 




       
  
                     
 


 
            


     
Alig confidence 































..













































Template Conservation 
      


 
  
 
 


      

  
..   
               
 


 
            

      
Template Sequence  SRVLFENFGDRVKNWITLNEPWVVAIVGHLYG. . VHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNG
Template Known Secondary structure  TTT


TS
..SSTT




TT



Template Predicted Secondary structure 














..















Template SS confidence 















































































   147..150.........160.........170........ .180.........190.........200.........210.........220....
 
   241........250.........260.........270.........280.........290.........300.........310.........320
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  NFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEM
Query Conservation     
      
  

           
    
 

                   
   
    







    
    
Alig confidence 

















.


























..































Template Conservation     
              .     
 
    
 

           ..
     
        







    
    
Template Sequence  YFEPASEDIRAVRFMHQF. NNYPLFLNPIYRGDYPELVLEFAREYL. . PENYKDDMSEIQEKIDFVGLNYYSGHLVKFDA
Template Known Secondary structure  S


.STSS

GGGS..
TTGGGGT


S




Template Predicted Secondary structure 





.













..

















Template SS confidence 















































































   225....230.........240.. .......250.........260......... 270.........280.........290.........300.
 
   321........330.........340.........350.........360....... ..370.........380.........390.........
Predicted Secondary structure 




























.















Query SS confidence 














































.































Query Sequence  NANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKP. LFLVENGLGAKDEFAANGEINDDYRISYLREH
Query Conservation                       
   
 
 
 

   
     

  
.
 




              
  
  

   
Alig confidence 


........



































.































Template Conservation     ........              
 
 
 

   
  
   
  


 




            
 
  

 

   
Template Sequence  PAK. . . . . . . . VSFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAH
Template Known Secondary structure  TTS........

SS
B
TT

B

T

S









TTS



Template Predicted Secondary structure 


........



































Template SS confidence 















































































   307.. 310.........320.........330.........340.........350.........360.........370........
 
   400.........410.........420.........430.........440.........450.........460.........470..
Predicted Secondary structure 
































Query SS confidence 








































































Query Sequence  IRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGED
Query Conservation 
     

 


 
 

  


 

 

  
 
  



  

       
  
 

 

  
  

  

  
Alig confidence 






























.












.....






















Template Conservation 
     

  

 
 

  


 

 

  
.
  



  

  .....   
 

 
   
  

   
  
Template Sequence  IGQAWKAIQEGVPLKGYFVWSLLDNFEWAEG. YSKRFGIVYVDYS. . . . . TQKRIVKDSGYWYSNVVKNNGLE
Template Known Secondary structure  TT


SB



GGGG.GG



STT.....TT
TT
Template Predicted Secondary structure 










.







.....







Template SS confidence 








































































   379380.........390.........400......... 410.........420.. .......430.........440.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions