Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence40.57%DateThu Jan 5 11:41:32 GMT 2012
Rank287Aligned Residues97
% Identity13%Templatec2ftpA_
PDB info PDB header:lyaseChain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  KEDIALMAEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKL
Query Conservation   


 
   

   




 



 
 
     
  

  
   
  
   

 




 




  
    


 
   
Alig confidence 
































































........






Template Conservation     
  
   
   
      

         
           
  

  
  
          ........       
Template Sequence  LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGC. . . . . . . . PYDGDVD
Template Known Secondary structure  TT

S
SS
TT

TT
B........TTTB


Template Predicted Secondary structure 














........






Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140........ .150.....
 
   154.....160.........170........
Predicted Secondary structure 





Query SS confidence 
























Query Sequence  VEFFSRYARTCFEAFDGLVKYWLTF
Query Conservation 
  
  

      




  
 

Alig confidence 
























Template Conservation                
 
 
 
 

 
Template Sequence  PRQVAWVARELQQMGCYEVSLGDTI
Template Known Secondary structure  TT
SSS
Template Predicted Secondary structure 







Template SS confidence 
























   156...160.........170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions