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Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank24Aligned Residues447
% Identity29%Templatec2e3zB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of intracellular family 1 beta-2 glucosidase bgl1a from the basidiomycete phanerochaete3 chrysosporium in substrate-free form
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMA
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Template Sequence  AKLPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKAPGKIA. . . . . . . . . . . . . . DGSSGDVATDSYNRWREDVQLLK
Template Known Secondary structure 

B
TT





TTGGG


BTTSTTSST..............TS

SSSTT
TTTT
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   4.....10.........20.........30.........40...... ...50.........60.........
 
   82.......90.........100... ......110.........120.........130.........140.........150 .........
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Query Sequence  EMGFKVFRTSIAWSRLFPQGDE. ITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRN. RKLVEFFSR
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Template Sequence  SYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALDDRYGGWLNKEEAIQDFTN
Template Known Secondary structure  TT
S

STT
STTS


TT
SS

B
GGGS
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   70.........80.........90.........100.........110.........120.........130.........140.........
 
   160.........170.........180.........190.........200.........210.........220....... ..230......
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Query Sequence  YARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEV. . . NPQNQVGCM
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Template Sequence  YAKLCFESFGDLVQNWITFNEPWVISVMGYGNG. . IFAPGHVSNTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGIT
Template Known Secondary structure  TTT


TB
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B
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   150.........160.........170.........180.. .......190.........200.........210.........220.......
 
   237..240.........250.........260. ........270.........280.........290.........300.........310.....
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Query Sequence  LAGGNFYPYSCKPEDVWAALEKDRE. NLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRC
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Template Sequence  LDSHWLIPYDDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDR. . LPEFTPEEIELVKGSSDFFGLNTYTTHL
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SSSSTTSS

GGG..S



TT

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   228.230.........240.........250.........260.........270....... ..280.........290.........300.....
 
   316...320.... .....330.........340...... ...350.........360.........370.........380.. .......390
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Query Sequence  ASAEMNANN. . SSAANVVKSLRNPYLQVSDWGW. GIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFA. . ANGEINDD
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Template Sequence  VQDGGSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGPGFRWLLNYLWKAYDKPVYVTENGFPVKGENDLPVEQAVDDT
Template Known Secondary structure 



GGGTSSB
TTS
BSS
B
SSTT
B


S




TTGGGS
T

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   306...310.........320.........330.........340.........350.........360.........370.........380.....
 
   391........400....... ..410.........420.........430.........440.........450.........460.........
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Query Sequence  YRISYLREHIRAMGEAI. ADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASN
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Template Sequence  DRQAYYRDYTEALLQAVTEDGADVRGYFGWSLLDNFEWAEG. YKVRFGVTHVDYE. . . . . TQKRTPKKSAEFLSRWFKEH
Template Known Secondary structure  TS


S
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GGGT.TSS


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   386...390.........400.........410.........420...... ...430......... 440.........450.........
 
   470..
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Query Sequence  GED
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Template Conservation 

 
Template Sequence  IEE
Template Known Secondary structure  B

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   460..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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