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Job DescriptionP24240
Confidence99.98%DateThu Jan 5 11:41:32 GMT 2012
Rank49Aligned Residues303
% Identity15%Templatec2depA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:thermostable celloxylanase; PDBTitle: crystal structure of xylanase b from clostridium2 stercorarium f9
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  FPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEM
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Template Conservation      
  
 
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Template Sequence  FRDYFPIGAAIEPGYTT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GQIAELYKK
Template Known Secondary structure  TTTT


GGGSS......................................................
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   51........60....... ..70......
 
   84.....90 .........100.........110.........120......... 130.........140.......
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Query Sequence  GFKVFRT. . SIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPL. . VTLCHFDVPMHLVTEYGS. . . . . . . . . . . .
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Template Sequence  HVNMLVAENAMKPASLQPTEGNFQW. . . . . ADADRIVQFAKENGMELRFHTLVWHNQTPDWFFLD. KEGKPMVEETDPQK
Template Known Secondary structure 
SSSTTS
SBTTB


.....TT
SSS

GGGGB
.TTSSBGGG


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   77..80.........90.........100. ........110.........120.........130...... ...140.........150
 
   148.150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  . . WRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAH
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Template Sequence  REENRKLLLQRLENYIRAVVLRYKDDIKSWDVVNEVIEPNDPGGMRNSPWYQITGTE. . . . . . . . . . . . . YIEVAFRATR
Template Known Secondary structure  TTT



B
TTSGGGB


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   151........160.........170.........180.........190.........200....... ..210.......
 
   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  EVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDF
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Template Sequence  EAGGSDIKLYINDYNTD. . . . . DPVKRDILYELVK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NLLEKGVPIDG
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SSSS
TT.....S..................................TT



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   218.220.........230.... .....240....... ..250........
 
   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  VSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANG
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Template Sequence  VGHQTHI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DIYNPPVERIIESIKKFA. GLGLDNIITELDMSIYSWNDRSD
Template Known Secondary structure 

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S
.TTT
SS
TT



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   259260..... ....270.........280... ......290.........300......
 
   386.. .390.........400.........410.........420.........430..... ....440.........450.....
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Query Sequence  EIN. . . . . . DDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKR. . . . YGFVFVDRDDAGNGTLTRTR
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Template Sequence  YGDSIPDYILTLQAKRYQELFDALKEN. . . KDIVSAVVFWGISDKYSWLNG. FPVKRTNAPLLFDRNFM. . . . . . . . . . P
Template Known Secondary structure 

S


TT...GGGS
SBTTS
GGGT.SSSSS



SSB
TTS
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   307..310.........320.........330... ......340.........350.... .....360.........370. .
 
   456...460....
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Query Sequence  KKSFWWYKK
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Template Sequence  KPAFWAIVD
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   373......380.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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