Job Description P24240 Confidence 52.31% Date Thu Jan 5 11:41:32 GMT 2012 Rank 257 Aligned Residues 102 % Identity 13% Template c2d0gA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase i; PDBTitle: crystal structure of thermoactinomyces vulgaris r-47 alpha-2 amylase 1 (tvai) mutant d356n/e396q complexed with p5, a3 pullulan model oligosaccharide Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure											.																																																															.	.	.	.	.	.	.	.
Query SS confidence											.																																																															.	.	.	.	.	.	.	.
Query Sequence		V	F	P	E	S	F	L	W	G	.	G	A	L	A	A	N	Q	S	E	G	A	F	R	E	G	D	K	G	L	T	T	V	D	M	I	P	H	G	E	H	R	M	A	V	K	L	G	L	E	K	R	F	Q	L	R	D	D	E	F	Y	P	S	H	E	A	T	D	F	Y	H	R	Y	.	.	.	.	.	.	.	.
Query Conservation											.																																																															.	.	.	.	.	.	.	.
Alig confidence											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	P	D	R	F	Y	N	G	D	S	S	N	D	V	Q	T	G	S	Y	T	Y	N	G	T	P	T	E	K	K	A	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	V	Y	A	D	P	G	Y	D	N	S	L	V	F	F	G	G	D	L	A	G	I
Template Known Secondary structure				G	G	G	T			S		G	G	G				T	T	S		B	S	S	S		B						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S			T	T	S		G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		74	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.											.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.
Predicted Secondary structure											.																					.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence											.																					.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		K	E	D	I	A	L	M	A	E	.	M	G	F	K	V	F	R	T	S	I	A	W	S	R	L	F	P	Q	G	D	.	.	.	.	.	.	.	.	.	.	E	I	T	P	N	Q	Q	G	I	A	F	Y	R	S	V	F	E	E	C	K	K	Y	G	.	.	.	.	I	E	P	L	V	T	L
Query Conservation											.																					.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence											.											.	.	.	.							.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		D	Q	K	L	G	Y	I	K	K	T	L	G	A	N	I	L	Y	L	N	P	.	.	.	.	I	F	K	A	P	T	N	H	K	Y	D	T	Q	D	Y	M	A	V	D	P	A	F	G	D	N	S	T	L	Q	T	L	I	N	D	I	H	S	T	A	N	G	P	K	G	Y	L	I	L	D	G
Template Known Secondary structure				T						T	T	T								S		.	.	.	.					S	S	S	S			S		S							T	T	T																S	S	S	S	S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions