Job Description P24240 Confidence 96.15% Date Thu Jan 5 11:41:32 GMT 2012 Rank 147 Aligned Residues 203 % Identity 18% Template c2bvtB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-1,4-mannanase; PDBTitle: the structure of a modular endo-beta-1,4-mannanase from2 cellulomonas fimi explains the product specificity of3 glycoside hydrolase family 26 mannanases. Resolution 2.9 Å

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		129	130	.	.		.	.	.	.	.	.															.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.
Query SS confidence						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.
Query Sequence		L	V	T	L	.	C	H	F	D	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	H	L	V	T	E	Y	G	S	W	R	N	R	K	L	.	.	.	V	E	F	F	S	R	Y	A	R	T	C	F	E	A	F	D	G	L	V	K	.	Y	W	L	T	F	N	E	I	N	I	M	L	H	S	P	F
Query Conservation						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																					.
Alig confidence						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.									.	.	.																					.								.	.	.	.	.	.	.	.	.
Template Conservation																																.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		V	N	T	V	S	A	H	V	E	N	F	V	T	G	G	S	F	Y	D	T	S	G	D	T	L	R	A	V	L	P	.	.	G	G	S	H	H	A	E	L	V	A	Y	L	D	D	I	A	E	L	A	D	A	S	R	R	D	D	G	T	L	I	P	I	V	F	R	P	W	H	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											B	T	T	T	T	B		T	T				T	T						S	T	.	.	T		T	T																			B		T	T			B								S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																											.														.
Query SS confidence																																											.														.
Query Sequence		S	G	A	G	L	V	F	E	E	G	E	N	Q	D	Q	V	K	Y	Q	A	A	H	H	Q	L	V	A	S	A	L	A	T	K	I	A	H	E	V	N	P	Q	.	N	Q	V	G	C	M	L	A	G	G	N	F	Y	.	P	Y	S	C	K	P	E	D	V	W	A	A	L	E	K	D	R	E	N	L	F	F	I	D
Query Conservation																																											.														.
Alig confidence																					.	.	.	.	.	.	.	.	.	.													.				.	.	.								.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	G	S	W	F	W	W	G	A	A	Y	G	S	P	G	E	Y	Q	.	.	.	.	.	.	.	.	.	.	E	L	Y	R	F	T	V	E	Y	L	R	D	V	K	G	V	.	.	.	S	N	F	L	Y	A	W	G	P	G	G	G	F	G	G	N	R	D	V	Y	L	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S	S	S	S	T	T	S	G	G	G	S							.	.	.	.	.	.	.	.	.	.												T	T	T			.	.	.		S									S			T	T							.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	A	R	G	T	Y	P	A	Y	S	A	R	V	F	R	E	K	G	V	T	I	N	K	A	P	G	D	D	E	I	L	K	N	T	V	D	F	V	S	F	S	Y	Y	A	S	R	C	A	S	A	E	M	N	A	N	N	S	S	A	A	N	V	V	K	S	L	R	N	P	Y	L	Q	V	S	D	W	G	W	G
Query Conservation
Alig confidence		.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	R	T	Y	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	F	V	D	V	L	G	L	D	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	T	G	S	D
Template Known Secondary structure		.	.	.	.	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure		.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						232	.	.	.	.																								.	.	.	240	.	.	.	.	.	.	.	.																															.	250	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		I	D	P	L	G	L	R	I	T	M	N	.	.	.	M	M	Y	D	R	Y	Q	K	P	L	F	L	V	E	N	G	L	G	A	K	D	E	F	A	A	N	G	E	I	N	D	D	Y	R	I	S	Y	L	R	E	H	I	R	A	M	G	E	A	I	A	D	G	I	P	L	M	G	Y	T	T	W	G	C	I	D	L
Query Conservation													.	.	.
Alig confidence													.	.	.																														.	.	.	.	.	.													.															.	.	.
Template Conservation																																													.	.	.	.	.	.													.															.	.	.
Template Sequence		A	F	L	A	G	L	V	A	D	L	R	M	I	A	E	I	A	D	E	K	G	K	V	S	A	F	T	E	F	G	V	S	G	G	V	G	T	N	G	S	S	P	A	.	.	.	.	.	.	Q	W	F	T	K	V	L	A	A	I	K	A	.	D	P	V	A	S	R	N	A	Y	M	E	T	W	A	.	.	.	N
Template Known Secondary structure																						T					B						T	T		S	S	T	T	S				T	.	.	.	.	.	.	T												.	S	T	T	T	T			S							.	.	.	B
Template Predicted Secondary structure																																													.	.	.	.	.	.													.															.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.							.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.				.
		425	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	S	T	G	E	M	S	K
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		F	D	A	G	Q	H	.	F	V	P
Template Known Secondary structure			S	S	S	S	B	.	S	S
Template Predicted Secondary structure								.
Template SS confidence
		325	.	.	.	.	330		.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions