Job Description P24240 Confidence 99.79% Date Thu Jan 5 11:41:32 GMT 2012 Rank 77 Aligned Residues 286 % Identity 18% Template c2bs9B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-xylosidase; PDBTitle: native crystal structure of a gh39 beta-xylosidase xynb12 from geobacillus stearothermophilus Resolution 2.2 Å

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		73	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure										.											.	.	.	.	.	.	.	.
Query SS confidence										.											.	.	.	.	.	.	.	.
Query Sequence		Y	K	E	D	I	A	L	M	.	A	E	M	G	F	K	V	F	R	T	.	.	.	.	.	.	.	.	S	I	A	W	S	R	L	F	P	Q	G	D	E	I	T	P	N	Q	Q	G	I	A	F	Y	R	S	V	F	E	E	C	K	K	Y	G	I	E	P	L	V	T	L	C	H	F	D	V	P	M	H	L	V	T
Query Conservation										.											.	.	.	.	.	.	.	.
Alig confidence										.											.	.	.	.	.	.	.	.																						.	.	.																						.	.
Template Conservation																																																		.	.	.																						.	.
Template Sequence		Y	L	D	H	L	K	L	V	Q	E	K	I	G	F	R	Y	I	R	G	H	G	L	L	S	D	D	V	G	I	Y	R	E	V	E	I	D	G	E	M	K	P	F	Y	N	F	T	Y	I	.	.	.	D	R	I	V	D	S	Y	L	A	L	N	I	R	P	F	I	E	F	G	F	M	.	.	P	K	A	L	A	S
Template Known Secondary structure													S			S					S		T	T	S	T	T	T									T	T												.	.	.										T	T										B	.	.		G	G	G	B	S
Template Predicted Secondary structure																																																		.	.	.																						.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.
										144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	E	Y	G	S	W	R	N	R	K	L	V	E	F	F	S	R	Y	A	R	T	C	F	E	A	F	D	G	.	.	.	.	.	.	.	L	V	K	Y	W	L	T	F	N	E	I	N	I	M	L	H	S	P	F	S	G	A	G	L	V	F	E	E	G	E	N	Q	D	Q	V	K	Y	Q
Query Conservation		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.		.																										.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	Q	T	V	F	Y	W	K	.	G	N	V	T	P	P	K	D	Y	N	K	W	R	D	L	I	V	A	V	V	S	H	F	I	E	R	Y	G	I	E	E	V	R	T	W	L	F	E	V	W	N	E	P	N	L	V	N	F	W	K	D	A	N	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S					T	T	T	T	.				S		B	S																										T	T						S	S		T	T	S	T	T	T	S	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	H	H	Q	L	V	A	S	A	L	A	T	K	I	A	H	E	V	N	P	Q	N	Q	V	G	C	M	L	A	G	G	N	F	Y	P	Y	S	C	K	P	E	D	V	W	A	A	L	E	K	D	R	E	N	L	F	F	I	D	V	Q	A	R	G	T	Y	P	A	Y	S	A	R	V	F	R	E	K	G	V	T
Query Conservation
Alig confidence		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		.	.	.	E	Y	F	K	L	Y	E	V	T	A	R	A	V	K	S	V	D	P	H	L	Q	V	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	C	G	G	S	D	E	W	I	T	D	F	L	H	.	.	.	.	.
Template Known Secondary structure		.	.	.																		T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S		T									.	.	.	.	.
Template Predicted Secondary structure		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
					174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																																	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	N	K	A	P	G	D	D	E	I	L	K	N	T	V	D	F	V	S	F	S	Y	Y	A	S	R	C	A	S	A	E	M	N	A	N	N	S	S	A	A	N	V	V	K	S	L	R	N	P	Y	L	Q	V	S	D	W	G	W	G	I	D	P	L	G	L	R	I	T	M	N	M	M	Y	D	R	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	F	C	A	E	R	R	V	P	V	D	F	V	S	R	H	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	K	A	P	H	K	K	T	F	E	Y	Y	Y	Q	E	L	E	P	P	E	D	M	L	E	Q	F	K	T	V	R	A	L	I	R	Q	S	P
Template Known Secondary structure		.	.	.	.	.	.					T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B		S		S				S	S						B																				S	S
Template Predicted Secondary structure		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230																				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
			364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.				430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																																			.	.	.
Query SS confidence		.																																																																			.	.	.
Query Sequence		.	Y	Q	K	P	L	F	L	V	E	N	G	L	G	A	K	D	E	F	A	A	N	G	E	I	N	D	D	Y	R	I	S	Y	L	R	E	H	I	R	A	M	G	E	A	I	A	D	G	I	P	L	M	G	Y	T	T	W	G	C	I	D	L	V	S	A	S	T	.	.	.	G	E	M	S	K	R	Y	G	F	V
Query Conservation		.																																																																			.	.	.
Alig confidence		.																		.	.	.	.	.	.	.																										.	.																.	.	.
Template Conservation																				.	.	.	.	.	.	.																										.	.
Template Sequence		F	P	H	L	P	L	H	I	T	E	Y	N	T	S	Y	S	P	I	.	.	.	.	.	.	.	N	P	V	H	D	T	A	L	N	A	A	Y	I	A	R	I	L	S	E	G	G	D	Y	V	D	.	.	S	F	S	Y	W	T	F	S	D	V	F	E	E	M	D	V	P	K	A	L	F	H	G	G	F	G	L	V
Template Known Secondary structure			T	T										S		S		T	T	.	.	.	.	.	.	.		G	G	G	G	S														G	G	G	T		S	.	.					S		S	B	S				T	T	S	S		S	S	S	S	S			S		S
Template Predicted Secondary structure																				.	.	.	.	.	.	.																										.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	D	R	D	D	A	G	N	G	T	L	T	R	T	R	K	K	S	F	W	W	Y	K
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	H	S	I	.	.	.	.	.	.	.	.	.	.	P	K	P	T	F	H	A	F	T
Template Known Secondary structure			T	T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		340	.	.	.	.											.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions