Return to main results Retrieve Phyre Job Id

Job DescriptionP24240
Confidence100.00%DateThu Jan 5 11:41:32 GMT 2012
Rank21Aligned Residues444
% Identity30%Templatec1v02F_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:dhurrinase; PDBTitle: crystal structure of the sorghum bicolor dhurrinase 1
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  VFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAE
Query Conservation   

  
 

 



 



    

 
 
 

                               
 
 
  
 


 
   
Alig confidence 





































.............




























Template Conservation   

  



 



 
 

    



 
 

      .............            
 
 
 

 


 
  
Template Sequence  WFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNF. . . . . . . . . . . . . PEWIVDRSNGDVAADSYHMYAEDVRLLKE
Template Known Secondary structure  GS
TT





TTSTT


B
.............GGGSTTS

SSSTT
Template Predicted Secondary structure 























.............














Template SS confidence 















































































   24.....30.........40.........50.........60. ........70.........80.........90
 
   83......90.........100.. .......110.........120.........130.........140.........150.........160.
Predicted Secondary structure 











.

















Query SS confidence 



















.


























































Query Sequence  MGFKVFRTSIAWSRLFPQGD. EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYA
Query Conservation 

   




 



 
 
 .    
  

  
   
  
   

 




 




  
    


 
   
  
  

Alig confidence 



















.


























































Template Conservation 

  





 



 
 
   
  
  

  
   
  
   

 




 


 
  
    


     
  
  

Template Sequence  MGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDERIIKDYTDFA
Template Known Secondary structure  TT
S

STTSSSTT


TT
SS

B
GGGST
Template Predicted Secondary structure 

































Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   162.......170.........180.........190...... ...200.........210.........220.........
Predicted Secondary structure 



















..........







..
Query SS confidence 


































. . . . . . . . . .
































. .
Query Sequence  RTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVF. . . . . . . . . . EEGENQDQVKYQAAHHQLVASALATKIAHEVNP. .
Query Conservation        




  
 




       
  
    ..........                 
 


 
         ..
Alig confidence 


































..........
































..
Template Conservation    
   


 
  
 
 


       
  
   
                           
 


 
           
Template Sequence  KVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLAPGRCSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGA
Template Known Secondary structure  TTT


TS

STT
B

TTS
SSB
SS
TTTT
TT
Template Predicted Secondary structure 






































Template SS confidence 















































































   171........180.........190.........200.........210.........220.........230.........240.........250
 
   230.........240.........250......... 260.........270.........280.........290.........300........
Predicted Secondary structure 










.


























Query SS confidence 





























.
















































Query Sequence  QNQVGCMLAGGNFYPYSCKPEDVWAALEKD. RENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSF
Query Conservation     


        
      
  

    .       
    
 

                   
   
    




Alig confidence 





























.


























..



















Template Conservation     

         
      
  

            
    
 

           ..
     
        




Template Sequence  DGRIGLALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRV. . PYFKEKEQEKLVGSYDMIGI
Template Known Secondary structure  T


SSSSTSS

GGGS..



TT

S
Template Predicted Secondary structure 


















..








Template SS confidence 















































































   251........260.........270.........280.........290.........300........ .310.........320........
 
   309310.........320.........330 .........340...... ...350.........360.... .....370......
Predicted Secondary structure 


















..........














.
.






Query SS confidence 





















. . . . . . . . . .















.

















.











Query Sequence  SYYASRCASAEMNANNSSAANV. . . . . . . . . . VKSLRNPYLQVSDWGW. GIDPLGLRITMNMMYDRY. QKPLFLVENGLG
Query Conservation 


    
              ..........           
   
. 
 
 

   
     

.  

 




  
Alig confidence 





















..........















.

















.











Template Conservation 


    
                                   
   
  
 
 

   
     

   

 




  
Template Sequence  NYYTSTFSKHIDLSPNNSPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGLHDILMTMKNKYGNPPMYITENGMG
Template Known Secondary structure 





STT



SGGGGG
SB
TTS
BSS
B
SSSS
B

TTS






Template Predicted Secondary structure 





















































Template SS confidence 















































































   329330.........340.........350.........360.........370.........380.........390.........400........
 
   377..380 .........390.........400.........410.........420.........430.........440.........450....
Predicted Secondary structure 



..



































Query SS confidence 



. .









































































Query Sequence  AKDE. . FAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRT
Query Conservation      ..        
  
  

   
     

 


 
 

  


 

 

  
 
  



  

       
  
 
Alig confidence 



..

















































.













....




Template Conservation            
 
 
  

 

  

  
  

  

 
 

  


 

 

  
.
  



  

   ....   
 
Template Sequence  DIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDLGADVRGYFAWSLLDNFEWSSG. YTERFGIVYVDREN. . . . GCERT
Template Known Secondary structure 
SS




TT


SB



GGGG.GG

SGGG....TT
Template Predicted Secondary structure 


























.









....



Template SS confidence 















































































   409410.........420.........430.........440.........450.........460.... .....470........ .480...
 
   455....460......
Predicted Secondary structure 
Query SS confidence 











Query Sequence  RKKSFWWYKKVI
Query Conservation 

 

  
  

Alig confidence 











Template Conservation   
 
  

    
Template Sequence  MKRSARWLQEFN
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 











   484.....490.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions