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Job DescriptionP24240
Confidence99.38%DateThu Jan 5 11:41:32 GMT 2012
Rank107Aligned Residues319
% Identity13%Templatec1us2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endo-beta-1,4-xylanase; PDBTitle: xylanase10c (mutant e385a) from cellvibrio japonicus in2 complex with xylopentaose
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAE
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Template Sequence  LAPSDFPIGVAVSNTDSATYNLLTNS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . REQA. . VVKKH
Template Known Secondary structure  G
SSS

B
TT
TTTBTTT
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   254.....260.........270......... 280... .....
 
   83......90.........100.........110.........120........ .130..... ....140.........150........
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Query Sequence  MGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEP. . LVTLCHF. . DVPMHLVTEYGSWRNRKLVEFFS
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Template Sequence  FNHLTAGNIMKMSYMQPTEGNFNFTNA. . . . . DAFVDWATENNMTVHGHALVWHSDYQVPNFMKN. . WAGSAEDFLAALD
Template Known Secondary structure 
SSSTTS
SBTTB


.....TT



GGGS
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S
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   289290.........300.........310..... ....320.........330.........340........ .350.........360.
 
   159160........ .170.........180.........190.........200.........210.........220.........230......
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Query Sequence  RYARTCFEAF. . DGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCM
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Template Sequence  THITTIVDHYEAKGNLVSWDVVNA. . . . . . . . . AIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYN
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TT
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   362.......370.........380..... ....390.........400.........410.........420.........430..
 
   237..240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  LAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCA
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Template Sequence  DYNI. . . . . EQNNAKTTKMV. . . . . . . . . . . . . . . . . . . . DMVKDFQARSIP. . . . . . . . . . . . . . IDGVGFQMH. . . . .
Template Known Secondary structure  SST.....TS
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   433... ...440....... ..450......... 460........
 
   317..320.........330.........340........ .350.........360.........370.........380........
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Query Sequence  SAEMNANNSSAANVVKSLRNPYLQVSDWGWGI. DPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEIN. . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . VCMNYPSIANISAAMKKVV. DLGLLVKITELDVAVNQPHCDAYPANKINPLTE
Template Known Secondary structure  ...........................SS
S
.TTT
SS
TTSTTTTTT


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   469470.........480....... ..490.........500.........510.........520
 
   389390.........400.........410.........420.........430....... ..440.........450.......
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Query Sequence  . DDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYG. . . . . . . . . . FVFVDRDDAGNGTLTRTRKK
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Template Sequence  AAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLDG. LYRE. QFEDEKISWPLLFDNNYN. . . . . . . . . . DKP
Template Known Secondary structure  S
GGGS
SBGGG
.TTT.TTTT





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   521........530.........540.........550.........560... .... ..570.........580..... ...
 
   458.460......
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Query Sequence  SFWWYKKVI
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Template Sequence  ALRGFADAL
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   589590.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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