Return to main results Retrieve Phyre Job Id

Job DescriptionP25744
Confidence6.69%DateThu Jan 5 11:42:32 GMT 2012
Rank16Aligned Residues31
% Identity13%Templatec2k21A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:potassium voltage-gated channel subfamily e PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   378.380.........390.........400........
Predicted Secondary structure 








Query SS confidence 






























Query Sequence  AVFLVTAGVVLFNAVYSWNSLRRRRIPQVSN
Query Conservation                
      
  
    

Alig confidence 






























Template Conservation 


 

 

 
   



 





 
 
 
Template Sequence  YVLMVLGFFGFFTLGIMLSYIRSKKLEHSND
Template Known Secondary structure 




Template Predicted Secondary structure 



Template SS confidence 






























   46...50.........60.........70......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions