Return to main results Retrieve Phyre Job Id

Job DescriptionP46852
Confidence98.68%DateThu Jan 5 12:04:23 GMT 2012
Rank14Aligned Residues180
% Identity22%Templated2d40a1
SCOP infoDouble-stranded beta-helix RmlC-like cupins Gentisate 1,2-dioxygenase-like
Resolution2.41

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  VIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIMPEENGI
Query Conservation   
 

 

  




 






 
 
 
 

 

   
  
 

 



 

 


 
         




 
     
Alig confidence 












.

































..








.



















Template Conservation   
 

     
 
.       

 
 
  
 
 
       

 
  
..    
   
. 
      
   
 

   
Template Sequence  LIXPGEVAPSHRH. NQSALRFIVEGKGAFTAVDGERTPXNEGDFILTP. . QWRWHDHGN. PGDEPVIWLDGLDLPLVNIL
Template Known Secondary structure 
TT
.SS

SS
TT

TT

..TTS

.
SSS

Template Predicted Secondary structure 










.










..


.






Template SS confidence 















































































   94.....100...... ...110.........120.........130.........140 ......... 150.........160.........
 
   127..130.... .....140.........150.....
Predicted Secondary structure 


...................................................










Query SS confidence 







. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .




















Query Sequence  TPRYEQRR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FDAVQGKQLVLSPDARDGSLK
Query Conservation   
 
    ...................................................              
      
Alig confidence 







...................................................




















Template Conservation     
 
                                 
            
             
       
 

  
Template Sequence  GCGFAEDYPQQPVTRKEGDYLPRYAANXLPLRHQTGNSSPIFNYRYDRSREVLHDLTRLGDADEWDGYKXRYVNPVTGGY
Template Known Secondary structure  T









S
TTTSSS


SS



SS
S


TTS

BTTTB


TTTSS
Template Predicted Secondary structure 


























































Template SS confidence 















































































   170.........180.........190.........200.........210.........220.........230.........240.........
 
   156...160.........170.........180.........190... ..... .200.........210.........220.........230.
Predicted Secondary structure 













..

..















Query SS confidence 





































. .




. .
































Query Sequence  VHQDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVT. . INGVK. . ASTSDGLAIWDEQAISIHADSDSEVLLFDLPPV
Query Conservation             
  
              
 
  
   ..
    ..
  

         
 
 
   
  

 
 


Alig confidence 


















.

















..




..
































Template Conservation     
       
 

    . 
 
   

  
  
 
   
 
       

   

    
      
  
    
 
 
Template Sequence  PXPSXGAFLQLLPKGFASR. VARTTDSTIYHVVEGSGQVIIGNETFSFSAKDIFVVPTWHGVSFQTTQDSVLFSFSDRPV
Template Known Secondary structure  SSSS

TT
B

.
BSS
TTTT

TT

S
Template Predicted Secondary structure 











.


















Template SS confidence 















































































   252.......260.........270 .........280.........290.........300.........310.........320.........330
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions