 |
Job Description | P46852 | Confidence | 93.95% | Date | Thu Jan 5 12:04:23 GMT 2012 |
Rank | 90 | Aligned Residues | 67 |
% Identity | 16% | Template | d1od5a2 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.1 |
|
 |
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
. | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | E | A | G | Q | G | F | G | T | H | P | H | K | D | M | E | I | L | T | Y | V | L | E | G | T | . |
. |
V | E | H | Q | D | S | M | G | N | K | E | Q | . |
. |
. |
V | P | A | G | E | F | Q | I | M | S | A | G | T | G | I | R | H | S | E | Y | N | P | S | S | T | E | R | L | H | L | Y | Q | I |
Query Conservation |   |
  |
|   |
|
|   |
|
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|   | . | . |
|   |
|   |
|
|   |
|
|   |   |   | . | . | . |
|   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|   |   |
|
|   |
|
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|   |
| . | . |   |   |   |   |   |   |
| . | . |   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
V | L | Y | R | N | G | I | Y | S | P | H | W | N | L | N | A | N | S | V | I | Y | V | T | R | G | K | G | R | V | R | V | V | N | C | Q | G | N | A | V | F | D | G | E | L | R | R | G | Q | L | L | V | V | P | Q | N | . |
. |
F | V | V | A | E | Q | G | . |
. |
G | E | Q | G | L | E | Y | V | V | F |
Template Known Secondary structure |   |
 |  |
| T | T |
|  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T | . | . |
|  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | |
|
. | . | 430 | . | . | . | . | |
|
. | . | . | . | . | 440 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|