|   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
|
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
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|
|  |  |  |  |
|
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|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
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|
|
|
|
|
|
|
|
|
| . |
|
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|
| . |
. |
. |
. |
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|
Query Sequence |   |
S | A | L | R | V | I | N | D | D | V | I | E | A | G | Q | . |
G | F | G | T | H | P | H | K | D | M | E | I | L | T | Y | V | L | E | G | T | V | E | H | Q | . |
. |
. |
. |
D | S | M | G | N | K | E | Q | V | P | A | G | E | F | Q | I | M | S | A | G | T | G | I | R | H | S | E | Y | N | P | S | S | T | E | R | L |
Query Conservation |   |
|   |
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|   |
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|   |
|   |
|
|   | . |
|
|   |   |
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|   |
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|   |
|   |
|   |
|   | . | . | . | . |
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|   |
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|   |   |   |
|   |   |
|   |
|
|   |
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|   |
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|   |
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|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
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|
| . |
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| . | . | . | . |
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| . | . |
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|
| . | . |
|
|
Template Conservation |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |
|   |
|   |   |   |
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|   | . | . |
|   |
|
|
|
|   |   |
|   |
|   |   |   |   |   | . | . |   |
|
Template Sequence |   |
Y | A | F | T | L | M | G | T | N | A | P | H | S | D | A | L | G | V | L | P | H | I | H | Q | K | H | Y | E | N | F | Y | C | N | K | G | S | F | Q | L | W | A | Q | S | G | N | E | T | Q | Q | T | R | V | L | S | S | G | D | Y | . |
. |
G | S | V | P | R | N | V | T | H | T | F | Q | I | Q | D | P | . |
. |
D | T |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |  |
|
|
| S | S |
| S | S |
|
|  |  |
| S | S |
|  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |  | T | T |
|  | . | . |  |  |  |
| T | T |  |  |  |  |  |  |  |
| S | T | . | . | T |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |
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|
|  | . | . |  |  |  |
|
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|
|  |  |  |  |  |
|
|
| . | . |
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|
Template SS confidence |   |
|
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  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
120 | . |
  |
  |   |
113 | . | . | . | . | |
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. | . | 120 | |
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. | . | . | . | . | . | . | |
|
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|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
. |
. |
. |
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|
Query Sequence |   |
H | L | Y | Q | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | I | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | E | E | N | G | I | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | R | Y | E | Q | R | R | F | D | A | V | Q | G | K | Q |
Query Conservation |   |
  |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
E | M | T | G | V | I | V | P | G | G | F | E | D | L | F | Y | Y | L | G | T | N | A | T | D | T | T | H | T | P | Y | I | P | S | I | S | T | L | Q | S | F | D | V | Y | A | E | L | S | F | T | P | R | T | D | T | V | N | G | T | A | P | A | N | T | V | W | H | T | G | A | N | A | L | A | S | T | A | G | D | P | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S |
| T | T |  |  |  |  |  |  | S |  |  |
|
|
| T | T |
|
| S | S |
|
|
|
| G | G | G | G | G | G | T |
|  |  |
| T | T |
|
|
|
|
|
|
| B | T | T |  |  | S | S | S | S |
| S | S | S | S |
|
|
|
|
| S | S | T | T |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | |
|
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|
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|
|
|
|
. | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
|
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
|
|
|
|
| . |
. |
. |
. |
. |
|
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|
|
Query Sequence |   |
L | V | L | S | P | D | A | R | D | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | L | K | V | H | Q | D | M | E | L | Y | R | W | A | L | L | K | D | E | Q | S | V | H | Q | I | A | A | E | R | R | V | W | I | Q | V | V | K | G | N | V | T | I | . |
. |
. |
. |
. |
N | G | V | K | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
| . | . | . | . | . |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
| . | . | . | . | . |
|
|
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|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|   |
|   |
|   |   |
|   |   |
|
Template Sequence |   |
F | I | A | N | G | W | G | P | K | Y | L | N | S | Q | Y | G | Y | Q | I | V | A | P | F | V | T | A | T | Q | A | Q | D | T | N | Y | T | L | S | T | I | S | M | S | T | T | P | S | T | V | T | V | P | T | W | S | F | P | G | A | C | A | F | Q | V | Q | E | G | R | V | V | V | Q | I | G | D | Y | A | A | T | E | L |
Template Known Secondary structure |   |
 |  |
| T | T |
| S |
|  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |
|  |  |  |  | G | G | G |
|  |  |  |  |  |  |  |  |
|
|
|
| T | T | S |
|
|
|
| B |
|
| S | S |
|  |  |  |  |  |  |  | S |
|  |  |  |  |  | T | T | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
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|
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|
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
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|
  |   |
216 | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
  |
  |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
| . |
|
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|
Query Sequence |   |
S | T | S | D | G | L | A | I | W | D | E | Q | A | I | S | I | H | A | D | S | D | . |
S | E | V | L | L | F | D |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   | . |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
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|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
G | S | G | D | V | A | F | I | P | G | G | V | E | F | K | Y | Y | S | E | A | Y | F | S | K | V | L | F | V | S |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
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Template SS confidence |   |
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296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . |
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