Job Description P46852 Confidence 97.65% Date Thu Jan 5 12:04:23 GMT 2012 Rank 33 Aligned Residues 178 % Identity 17% Template d1j58a_ SCOP info Double-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein Resolution 1.75

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																	.	.													.	.																																.	.
Query SS confidence																																	.	.													.	.																																.	.
Query Sequence		V	I	N	D	D	V	I	E	A	G	Q	G	F	G	T	H	P	H	K	D	M	E	I	L	T	Y	V	L	E	G	T	.	.	V	E	H	Q	D	S	M	G	N	K	E	Q	.	.	V	P	A	G	E	F	Q	I	M	S	A	G	T	G	I	R	H	S	E	Y	N	P	S	S	T	E	R	L	H	L	Y	.	.
Query Conservation																																	.	.													.	.																																.	.
Alig confidence																							.										.	.													.	.							.	.																		.	.					.	.
Template Conservation																							.																																.	.																		.	.
Template Sequence		A	S	V	N	X	R	L	K	P	G	A	I	R	E	L	H	W	H	K	E	A	.	E	W	A	Y	X	I	Y	G	S	A	R	V	T	I	V	D	E	K	G	R	S	F	I	D	D	V	G	E	G	D	L	.	.	W	Y	F	P	S	G	L	P	H	S	I	Q	A	L	E	E	G	.	.	A	E	F	L	L	V
Template Known Secondary structure										T	T									S	S		.																	T	T	S									T	T			.	.					T	T												.	.
Template Predicted Secondary structure																							.																																.	.																		.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.
																																													116	.	.	.	120	.														.	.	.	.	.	.	.	.							130	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	W	I	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	N	G	I	T	P	R	.	.	.	.	.	.	Y	E	Q	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	D	G	S	F	S	E	N	S	T	F	Q	L	T	D	W	L	A	H	T	P	K	E	V	I	A	A	N	F	G	V	T	K	E	E	I	S	N	L	P	G	K	E	K	Y	I	F	E	N	Q	L	P	G	S	L	K	D	D	I	V	E	G	P	N	G	E	V	P	Y	P	F	T	Y	R	L	L	E	Q	E
Template Known Secondary structure			S		T	T			G	G	G										T	S										T			T	G	G	G	T	T	S		S	S			S																		T	T				S	S		S				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.					.	200	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.					.	.	.	.
Query SS confidence																																																															.	.	.	.	.					.	.	.	.
Query Sequence		R	F	D	A	V	Q	G	K	Q	L	V	L	S	P	D	A	R	D	G	S	L	K	V	H	Q	D	M	E	L	Y	R	W	A	L	L	K	D	E	Q	S	V	H	Q	I	A	A	E	R	R	V	W	I	Q	V	V	K	G	N	V	T	I	.	.	.	.	.	N	G	V	K	.	.	.	.	A	S	T	S	D	G
Query Conservation																																																															.	.	.	.	.					.	.	.	.
Alig confidence																			.	.	.	.																																									.	.	.	.	.					.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		P	I	E	S	E	G	G	K	V	Y	I	A	D	S	T	N	F	.	.	.	.	K	V	S	K	T	I	A	S	A	L	V	T	V	E	P	G	A	X	R	E	L	H	W	H	P	N	T	H	E	W	Q	Y	Y	I	S	G	K	A	R	X	T	V	F	A	S	D	G	H	A	R	T	F	N	Y	Q	A	G	D	V
Template Known Secondary structure						S	S							S	T	T	T	S	.	.	.	.	T	T			S										T	T									S	S	S									S										T	T									S	S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	W	D	E	Q	A	I	S	I	H	A	D	S	D	S	E	V	L	L	F	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	V	P	F	A	X	G	H	Y	V	E	N	I	G	D	E	P	L	V	F	L	E	I
Template Known Secondary structure						T	T		B							S	S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions