Job Description P46852 Confidence 98.67% Date Thu Jan 5 12:04:23 GMT 2012 Rank 15 Aligned Residues 164 % Identity 14% Template c3rnsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis Resolution 2.07 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	D	D	V	I	E	A	G	Q	G	F	G	T	H	P	H	K	D	M	E	I	L	T	Y	V	L	E	G	T	V	E	H	Q	D	S	M	G	N	K	E	Q	V	P	A	G	E	F	Q	I	M	S	A	G	T	G	I	R	H	S	E	Y	N	P	S	S	T	E	R	L	H	L	Y	Q	I	W	I	M	P	E
Query Conservation
Alig confidence																					.															.																			.	.																		.	.	.	.	.	.
Template Conservation																					.															.																			.	.																		.	.	.	.	.	.
Template Sequence		I	S	L	F	S	L	A	K	D	E	E	I	T	A	E	A	X	L	G	.	N	R	Y	Y	Y	C	F	N	G	N	G	E	I	F	.	I	E	N	N	K	K	T	I	S	N	G	D	F	L	E	I	T	A	.	.	N	H	N	Y	S	I	E	A	R	D	N	L	K	L	I	E	I	.	.	.	.	.	.	G	E
Template Known Secondary structure									T	T							S		S	S	.									S						.		S	S							T	T							S	.	.	S								S	S	S							.	.	.	.	.	.
Template Predicted Secondary structure																					.															.																			.	.																		.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.								.	.
Query SS confidence																																																																							.	.								.	.
Query Sequence		E	N	G	I	T	P	R	Y	E	Q	R	R	F	D	A	V	Q	G	K	Q	L	V	L	S	P	D	A	R	D	G	S	L	K	V	H	Q	D	M	E	L	Y	R	W	A	L	L	K	D	E	Q	S	V	H	Q	I	A	A	E	R	R	V	W	I	Q	V	V	K	G	N	.	.	V	T	I	N	G	V	K	.	.
Query Conservation																																																																							.	.								.	.
Alig confidence																													.	.	.	.	.	.	.	.	.																	.																	.	.								.	.
Template Conservation																													.	.	.	.	.	.	.	.	.																	.
Template Sequence		K	I	S	A	F	N	L	A	E	V	V	E	Y	Q	E	G	K	I	V	S	K	N	L	V	A	K	P	.	.	.	.	.	.	.	.	.	N	L	V	X	T	I	X	S	F	W	K	G	E	S	L	D	.	P	H	K	A	P	G	D	A	L	V	T	V	L	D	G	E	G	K	Y	Y	V	D	G	K	P	F	I
Template Known Secondary structure								S	G	G	G	S				T	T											T	.	.	.	.	.	.	.	.	.	T										T	T					.					S	S																T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.										.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	T	S	D	G	L	A	I	W	D	E	Q	A	I	S	I	H	A	D	S	D	S	E	V	L	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	K	G	E	S	A	V	L	P	A	N	I	P	H	A	V	E	A	E	T	E	N	F	K	X	L	L
Template Known Secondary structure				T	T							T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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