Job Description P46852 Confidence 99.19% Date Thu Jan 5 12:04:23 GMT 2012 Rank 5 Aligned Residues 168 % Identity 17% Template c3o14B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:anti-ecfsigma factor, chrr; PDBTitle: crystal structure of an anti-ecfsigma factor, chrr (maqu_0586) from2 marinobacter aquaeolei vt8 at 1.70 a resolution Resolution 1.70 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	N	D	D	V	I	E	A	G	Q	G	F	G	T	H	P	H	K	D	M	E	I	L	T	Y	V	L	E	G	T	V	E	H	Q	D	S	M	G	N	K	E	Q	V	P	A	G	E	F	Q	I	M	S	A	G	T	G	I	R	H	S	E	Y	N	P	S	S	T	E	R	L	H	L	Y	Q	I	W	I	M
Query Conservation
Alig confidence																											.											.	.	.	.	.									.	.														.	.
Template Conservation																											.											.	.	.	.	.									.	.														.	.
Template Sequence		R	A	T	S	I	V	R	Y	A	P	G	S	R	F	S	A	H	T	H	D	G	G	E	E	F	.	I	V	L	D	G	V	F	Q	D	E	.	.	.	.	.	H	G	D	Y	P	A	G	T	.	.	Y	V	R	N	P	P	T	T	S	H	V	P	G	.	.	S	A	E	G	C	T	I	F	V	K	L	W	Q	F
Template Known Secondary structure											T	T									S	S					.										T	.	.	.	.	.	T					T	T		.	.						T	T							.	.		S	S									S		S
Template Predicted Secondary structure																											.											.	.	.	.	.									.	.														.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	N	G	I	T	P	R	Y	E	Q	R	R	F	D	A	V	Q	G	K	Q	L	V	L	S	P	D	A	R	D	G	S	L	K	V	H	Q	D	M	E	L	Y	R	W	A	L	L	K	D	E	Q	S	V	H	Q	I	A	A	E	R	R	V	W	I	Q	V	V	K	G	N	V	T	I	N	G	V	K	A	S
Query Conservation
Alig confidence			.	.	.	.	.																			.																																						.	.
Template Conservation			.	.	.	.	.																			.																																						.	.
Template Sequence		D	.	.	.	.	.	P	A	D	R	T	Q	F	S	K	N	X	E	A	E	L	G	A	P	.	V	E	G	I	S	T	S	L	L	H	E	D	E	R	E	T	V	T	H	R	K	L	E	P	G	A	N	L	T	S	E	A	A	G	G	I	E	.	.	V	L	V	L	D	G	D	V	T	V	N	D	E	V	L	G
Template Known Secondary structure			.	.	.	.	.	T	T									T	G	G	G					.	B	T	T										S	S										T	T								S	S				.	.											T	T
Template Predicted Secondary structure			.	.	.	.	.																			.																																						.	.
Template SS confidence
		112						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	D	G	L	A	I	W	D	E	Q	A	I	S	I	H	A	D	S	D	S	E	V	L	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	A	W	L	R	L	P	E	G	E	A	L	S	A	T	A	G	A	R	G	A	K	I	W	X
Template Known Secondary structure		T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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