 |
Job Description | P46852 | Confidence | 94.24% | Date | Thu Jan 5 12:04:23 GMT 2012 |
Rank | 86 | Aligned Residues | 66 |
% Identity | 23% | Template | c2npiB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:protein clp1; |
PDBTitle: clp1-atp-pcf11 complex
|
Resolution | 2.95 Å |
|
 |
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | M | E | L | Y | R | W | A | L | L | K | D | E | Q | S | V | H | Q | I | A | A | E | R | R | V | W | I | Q | V | V | K | G | N | V | T | I | N | G | V | K | A | S | T | S | D | G | L | A | I | W | D | E | Q | A | I | S | I | H | A | D | S | D | S | E | V | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |   |
|   |   | . |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |
Template Sequence |   |
D | N | E | W | H | K | L | V | I | P | K | G | S | D | W | Q | I | D | L | K | A | E | G | K | L | I | V | K | V | N | S | G | I | V | E | I | F | G | T | E | L | A | V | D | D | E | Y | T | F | . |
Q | N | W | K | F | P | I | Y | A | V | E | E | T | E | L | L | W |
Template Known Secondary structure |   |
| S | S |
|  |  |  |  |  |
| T | T |  |  |  |  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  | S |
|  |  |  | T | T |  |  |
|
| T | T |
|  |  |  |  | . |
| S |
|  |  |  |  |  |  | S | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|