Job Description P46852 Confidence 97.12% Date Thu Jan 5 12:04:23 GMT 2012 Rank 49 Aligned Residues 180 % Identity 14% Template c2d5fB_ PDB info PDB header:plant protein Chain: B: PDB Molecule:glycinin a3b4 subunit; PDBTitle: crystal structure of recombinant soybean proglycinin a3b4 subunit, its2 comparison with mature glycinin a3b4 subunit, responsible for hexamer3 assembly Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	D	D	V	I	E	A	G	Q	G	F	G	T	H	P	H	K	D	M	E	I	L	T	Y	V	L	E	G	T	V	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	S	M	G	N	K	E	Q	V	P	A	G	E	F	Q	I	M	S	A	G	T	G	I	R	H	S	E	Y	N
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																	.																																																		.	.
Template Sequence		V	S	K	R	T	L	N	R	N	G	L	H	L	P	S	.	Y	S	P	Y	P	Q	M	I	I	V	V	Q	G	K	G	A	I	G	F	A	F	P	G	C	P	E	T	F	E	K	P	Q	Q	L	Q	D	S	H	Q	K	I	R	H	F	N	E	G	D	V	.	.	L	V	I	P	P	G	V	P	Y	W	T	Y	N
Template Known Secondary structure									T	T							.			S	S																		T	T																S							T	T			.	.					T	T
Template Predicted Secondary structure																	.																																																		.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	S	T	E	R	L	H	L	Y	Q	I	W	I	M	P	E	E	N	G	.	I	T	P	R	Y	E	Q	R	R	F	D	A	V	Q	G	K	Q	L	V	L	S	P	D	A	R	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	T	G	D	E	P	V	V	A	I	S	L	L	D	T	S	N	F	N	N	Q	L	D	Q	N	P	R	V	F	Y	L	A	G	N	P	D	I	E	H	P	E	T	M	Q	E	G	G	S	V	L	S	G	F	S	K	H	F	L	A	Q	S	F	N	T	N	E	D	T	A	E	K	L	R	S	P	D	D	E	R	K
Template Known Secondary structure		.		S	S	S										T	T		T	T			S		S	S						S	S	S					S		G	G	G	G						S	G	G	G	S									T	T									T	T		S	S			S
Template Predicted Secondary structure		.
Template SS confidence
			136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
																																																									153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	K	V	H	Q	D	M	E	L	Y	R	W	A	L	L	K	D	E	Q	S	V	H	Q	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	V	T	V	E	G	G	L	S	V	I	S	P	K	W	G	V	E	E	N	I	C	T	M	K	L	H	E	N	I	A	R	P	S	R	A	D	F	Y	N	P	K	A	G	R	I	S	T	L	N	S	L	T	L	P	A	L	R	Q	F	G	L	S	A	Q	Y	V	V	L	Y	R	N	G	I	Y	S	P	H	W
Template Known Secondary structure		S					T	T							S				T	T	T	T	G	G	G										G	G	G		S				T	T	T							S	T	T	T	S	T	T					T										T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.										.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																							.
Query SS confidence																				.	.	.	.	.	.	.	.	.																							.
Query Sequence		A	A	E	R	R	V	W	I	Q	V	V	K	G	N	V	T	I	N	.	.	.	.	.	.	.	.	.	G	V	K	A	S	T	S	D	G	L	A	I	W	D	E	Q	A	I	S	I	H	A	.	D	S	D	S	E	V	L	L	F
Query Conservation																				.	.	.	.	.	.	.	.	.																							.
Alig confidence																				.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		N	L	N	A	N	S	V	I	Y	V	T	R	G	K	G	R	V	R	V	V	N	Q	G	N	A	V	F	D	G	E	L	R	R	G	Q	L	L	V	V	P	Q	N	F	V	V	A	E	Q	G	G	E	Q	G	L	E	Y	V	V	F
Template Known Secondary structure			S	S																														T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions