Job Description P46852 Confidence 93.10% Date Thu Jan 5 12:04:23 GMT 2012 Rank 91 Aligned Residues 193 % Identity 17% Template c1uijA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:beta subunit of beta conglycinin; PDBTitle: crystal structure of soybean beta-conglycinin beta2 homotrimer (i122m/k124w) Resolution 2.50 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		D	P	N	F	M	G	F	S	A	L	R	V	I	N	D	D	V	I	E	A	G	Q	G	F	G	T	H	P	H	K	D	M	E	I	L	T	Y	V	L	E	G	.	.	.	.	T	V	E	H	Q	D	S	M	G	N	K	E	Q	V	P	A	G	E	F	Q	I	M	S	A	G	T	G	I	R	H	S	E	Y	N	P
Query Conservation																																											.	.	.	.
Alig confidence																	.												.														.	.	.	.										.										.	.
Template Conservation																	.												.																											.										.	.
Template Sequence		S	P	Q	L	E	N	L	R	D	Y	R	I	V	Q	F	.	Q	S	K	P	N	T	I	L	L	P	H	.	H	A	D	A	D	F	L	L	F	V	L	S	G	R	A	I	L	T	L	V	N	N	D	D	R	D	.	S	Y	N	L	H	P	G	D	A	.	.	Q	R	I	P	A	G	T	T	Y	Y	L	V	N	P
Template Known Secondary structure			G	G	G	G	G	G	T	T							.				T	T							.			S										S									S	S				.						T	T			.	.					T	T
Template Predicted Secondary structure																	.												.																											.										.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	T	E	R	L	H	L	Y	Q	I	W	I	M	P	E	E	N	G	I	T	P	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	D	H	Q	N	L	K	M	I	W	L	A	I	P	V	N	K	P	G	R	Y	D	D	F	F	L	S	S	T	Q	A	Q	Q	S	Y	L	Q	G	F	S	H	N	I	L	E	T	S	F	H	S	E	F	E	E	I	N	R	V	L	F	G	E	E	E	E	Q	R	Q	Q	E	G	V	I	V	E	L	S	K	E	Q
Template Known Secondary structure			S	S												S	S	B	T	T	B						S	S		B	S	S				G	G	G	G	S										T	S										T		T	T		G	G	G	S	B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
																											131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	R	R	F	D	A	V	Q	G	K	Q	L	V	L	S	P	D	A	R	D	G	S	L	K	V	H	Q	D	M	E	L	Y	R	W	A	L	L	K	D	E	Q	S	V	H	Q	I	A	A	E	R	R	V	W	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	Q	L	S	R	R	A	K	S	S	S	R	K	T	I	S	S	E	D	E	P	F	N	L	R	S	R	N	P	I	Y	S	N	N	F	G	K	F	F	E	I	T	P	E	K	N	P	Q	L	R	D	L	D	I	F	L	S	S	V	D	I	N	E	G	A	L	L	L	P	H	F	N	S	K	A	I	V	I	L
Template Known Secondary structure						T	S	S		B				G	G	G	G	G		S	S	S				T	T	S	S			S				S	S								T	T	T								T										T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		186	.	.	.	190	.	.	.	.	.												.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	V	K	G	N	V	T	I	N	.	.	.	.	.	.	.	.	.	.	.	G	V	K	A	S	T	S	D	G	L	A	I	W	D	E	Q	A	I	S	I	H	A	D	S	D	S	E	V	L	L	F	D	L
Query Conservation												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	N	E	G	D	A	N	I	E	L	V	G	I	K	L	E	V	Q	R	Y	R	A	E	L	S	E	D	D	V	F	V	I	P	A	A	Y	P	F	V	V	N	A	T	S	N	L	N	F	L	A	F	G	I
Template Known Secondary structure						S																						T	T							T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions