Job Description P46852 Confidence 97.56% Date Thu Jan 5 12:04:23 GMT 2012 Rank 38 Aligned Residues 180 % Identity 16% Template c1fxzC_ PDB info PDB header:plant protein Chain: C: PDB Molecule:glycinin g1; PDBTitle: crystal structure of soybean proglycinin a1ab1b homotrimer Resolution 2.80 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		I	N	D	D	V	I	E	A	G	Q	G	F	G	T	H	P	H	K	D	M	E	I	L	T	Y	V	L	E	G	T	V	E	H	.	.	.	.	.	.	.	.	Q	D	S	M	G	N	K	E	Q	V	P	A	G	E	F	Q	I	M	S	A	G	T	G	I	R	H	S	E	Y	N	P	S	S	T	E	R	L	H	L
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																	.																		.	.	.	.	.	.	.	.																.	.														.
Template Conservation																	.																																									.	.														.
Template Sequence		L	S	R	C	T	L	N	R	N	A	L	R	R	P	S	.	Y	T	N	G	P	Q	E	I	Y	I	Q	Q	G	K	G	I	F	G	M	I	Y	P	G	C	P	S	T	R	H	Q	K	I	Y	N	F	R	E	G	D	L	.	.	I	A	V	P	T	G	V	A	W	W	M	Y	N	.	N	E	D	T	P	V	V	A
Template Known Secondary structure									T	T							.			S	S																		S	S														T	T			.	.					T	T								.		S	S	S
Template Predicted Secondary structure																	.																																									.	.														.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																		.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	I	W	I	M	P	E	E	N	G	.	I	T	P	R	Y	E	Q	R	R	F	D	A	V	Q	G	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	L	S	P	D	A	R	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	I	I	D	T	N	S	L	E	N	Q	L	D	Q	M	P	R	R	F	Y	L	A	G	N	Q	E	Q	E	F	L	K	Y	Q	Q	G	G	S	I	L	S	G	F	T	L	E	F	L	E	H	A	F	S	V	D	K	Q	I	A	K	N	L	Q	G	E	K	G	A	I	V	T	V	K	G	G	L	S	V	I	K
Template Known Secondary structure							T	T	S	T	T			S		S	S						S	S	S	S				T	T									S	S	T	T	S										T										S					S					S	S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
																																					153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	K	V	H	Q	D	M	E	L	Y	R	W	A	L	L	K	D	E	Q	S	V	H	Q	I	A	A	E	R	R	V	W	I	Q	V	V	K	G	N	V	T	I	N	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Conservation
Template Sequence		P	I	C	T	M	R	L	R	H	N	I	G	Q	T	S	S	P	D	I	Y	N	P	Q	A	G	S	V	T	T	A	T	S	L	D	F	P	A	L	S	W	L	R	L	S	A	E	F	G	S	L	R	K	N	A	M	F	V	P	H	Y	N	L	N	A	N	S	I	I	Y	A	L	N	G	R	A	L	I	Q	V	V
Template Known Secondary structure					S								S	S		S			S				T	T	T								T	T	T		T	T					T										T	T									S	S										S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
										196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	.	.	G	V	K	A	S	T	S	D	G	L	A	I	W	D	E	Q	A	I	S	I	H	A	.	D	S	D	S	E	V	L	L	F
Query Conservation		.	.	.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		N	C	N	G	E	R	V	F	D	G	E	L	Q	E	G	R	V	L	I	V	P	Q	N	F	V	V	A	A	R	S	Q	S	D	N	F	E	Y	V	S	F
Template Known Secondary structure			T	T	S										T	T							S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions