Job Description P0ADW8 Confidence 64.44% Date Thu Jan 5 11:22:00 GMT 2012 Rank 14 Aligned Residues 45 % Identity 20% Template c1i3qI_ PDB info PDB header:transcription Chain: I: PDB Molecule:dna-directed rna polymerase ii 14.2kd PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	A	C	Q	A	Q	D	S	M	A	M	W	R	E	N	N	I	D	I	V	E	C	V	K	C	G	H	Q	M	R	E	A	D	K	E	A	R	D	H	V	R	K	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	R	D	C	N	N	M	L	Y	P	R	E	D	K	E	N	N	R	L	L	F	E	C	R	T	C	S	Y	V	E	E	A	G	S	P	L	V	Y	R	H	E	L	I	T	N
Template Known Secondary structure			S	S	S			B							T	T	T	T							S	S	S							S		S							S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions