Email l.a.kelley@imperial.ac.uk Description P64474 Date Thu Jan 5 12:08:43 GMT 2012 Unique Job ID 9583281d595967f2

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ms6A_ 46.6 33 PDB header:protein binding Chain: A: PDB Molecule:hepatitis b virus x-interacting protein; PDBTitle: crystal structure of hepatitis b x-interacting protein (hbxip) 2 c3kgkA_ 35.7 21 PDB header:chaperone Chain: A: PDB Molecule:arsenical resistance operon trans-acting repressor arsd; PDBTitle: crystal structure of arsd 3 d1mxra_ 29.5 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 4 c1yfdA_ 27.8 14 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 1 beta PDBTitle: crystal structure of the y122h mutant of ribonucleotide2 reductase r2 protein from e. coli 5 d1r2fa_ 25.7 23 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 6 c3ee4A_ 25.0 41 PDB header:oxidoreductase Chain: A: PDB Molecule:probable ribonucleoside-diphosphate reductase; PDBTitle: r2-like ligand binding mn/fe oxidase from m. tuberculosis 7 c2o1zA_ 25.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleotide reductase subunit r2; PDBTitle: plasmodium vivax ribonucleotide reductase subunit r22 (pv086155) 8 c1r2fB_ 24.3 23 PDB header:oxidoreductase Chain: B: PDB Molecule:protein (ribonucleotide reductase r2); PDBTitle: ribonucleotide reductase r2f protein from salmonella2 typhimurium 9 d1uw0a_ 24.2 13 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:PARP-type zinc finger 10 c2vuxB_ 24.1 23 PDB header:oxidoreductase Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 b; PDBTitle: human ribonucleotide reductase, subunit m2 b 11 c3pqaA_ 23.5 11 PDB header:oxidoreductase Chain: A: PDB Molecule:lactaldehyde dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase gapn2 from methanocaldococcus jannaschii dsm 2661 12 d1w68a_ 23.2 9 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 13 c3ktbD_ 23.1 8 PDB header:transcription regulator Chain: D: PDB Molecule:arsenical resistance operon trans-acting repressor; PDBTitle: crystal structure of arsenical resistance operon trans-acting2 repressor from bacteroides vulgatus atcc 8482 14 c2rccC_ 23.0 5 PDB header:oxidoreductase Chain: C: PDB Molecule:ribonucleoside-diphosphate reductase subunit beta; PDBTitle: crystal structure of putative class i ribonucleotide reductase2 (np_241368.1) from bacillus halodurans at 1.90 a resolution 15 d1oquc_ 22.9 27 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 16 c1vluB_ 22.9 12 PDB header:oxidoreductase Chain: B: PDB Molecule:gamma-glutamyl phosphate reductase; PDBTitle: crystal structure of gamma-glutamyl phosphate reductase (yor323c) from2 saccharomyces cerevisiae at 2.40 a resolution 17 c3hf1B_ 22.5 23 PDB header:oxidoreductase Chain: B: PDB Molecule:ribonucleoside-diphosphate reductase subunit m2 PDBTitle: crystal structure of human p53r2 18 d1uzra_ 22.5 27 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 19 d1o20a_ 22.4 12 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 20 c1h0oA_ 22.1 9 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase; PDBTitle: cobalt substitution of mouse r2 ribonucleotide reductase to2 model the reactive diferrous state 21 c3ry0A_ not modelled 21.8 12 PDB header:isomerase Chain: A: PDB Molecule:putative tautomerase; PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway 22 d1bjpa_ not modelled 21.3 21 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 23 d3dhza1 not modelled 21.2 27 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 24 d2doaa1 not modelled 19.7 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ELL N2 domain-like 25 d1otfa_ not modelled 19.2 16 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 26 c2op8A_ not modelled 19.2 10 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase 27 c3fghA_ not modelled 19.1 23 PDB header:transcription Chain: A: PDB Molecule:transcription factor a, mitochondrial; PDBTitle: human mitochondrial transcription factor a box b 28 d1v54d_ not modelled 17.8 42 Fold:Single transmembrane helix Superfamily:Mitochondrial cytochrome c oxidase subunit IV Family:Mitochondrial cytochrome c oxidase subunit IV 29 c2y69Q_ not modelled 17.8 42 PDB header:electron transport Chain: Q: PDB Molecule:cytochrome c oxidase subunit 4 isoform 1; PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular2 oxygen 30 c3mb2G_ not modelled 17.7 12 PDB header:isomerase Chain: G: PDB Molecule:4-oxalocrotonate tautomerase family enzyme - alpha subunit; PDBTitle: kinetic and structural characterization of a heterohexamer 4-2 oxalocrotonate tautomerase from chloroflexus aurantiacus j-10-fl:3 implications for functional and structural diversity in the4 tautomerase superfamily 31 c3r64A_ not modelled 17.3 11 PDB header:oxidoreductase Chain: A: PDB Molecule:nad dependent benzaldehyde dehydrogenase; PDBTitle: crystal structure of a nad-dependent benzaldehyde dehydrogenase from2 corynebacterium glutamicum 32 c2e5nA_ not modelled 16.4 10 PDB header:transcription Chain: A: PDB Molecule:rna polymerase ii elongation factor ell2; PDBTitle: solution structure of the ell_n2 domain of target of rna2 polymerase ii elongation factor ell2 33 d1vlua_ not modelled 16.1 12 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 34 c1v9xA_ not modelled 16.1 11 PDB header:transferase Chain: A: PDB Molecule:poly (adp-ribose) polymerase; PDBTitle: solution structure of the first zn-finger domain of2 poly(adp-ribose) polymerase-1 35 c2kzyA_ not modelled 16.0 26 PDB header:metal binding protein Chain: A: PDB Molecule:zfand5 protein (zinc finger protein 216 (predicted), PDBTitle: solution nmr structure of the znf216 a20 zinc finger 36 c3ed6B_ not modelled 15.4 12 PDB header:oxidoreductase Chain: B: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: 1.7 angstrom resolution crystal structure of betaine aldehyde2 dehydrogenase (betb) from staphylococcus aureus 37 c3v4cB_ not modelled 15.3 15 PDB header:oxidoreductase Chain: B: PDB Molecule:aldehyde dehydrogenase (nadp+); PDBTitle: crystal structure of a semialdehyde dehydrogenase from sinorhizobium2 meliloti 1021 38 d1uzba_ not modelled 14.9 13 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 39 d1bc6a_ not modelled 14.8 39 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 40 c2zetD_ not modelled 14.8 16 PDB header:signaling protein Chain: D: PDB Molecule:melanophilin; PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin 41 c2eqzA_ not modelled 14.6 22 PDB header:transcription Chain: A: PDB Molecule:high mobility group protein b3; PDBTitle: solution structure of the first hmg-box domain from high2 mobility group protein b3 42 c3m20A_ not modelled 14.4 16 PDB header:isomerase Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative; PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution 43 c2ormA_ not modelled 14.4 16 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase hp0924; PDBTitle: crystal structure of the 4-oxalocrotonate tautomerase homologue dmpi2 from helicobacter pylori. 44 c1j3xA_ not modelled 13.8 26 PDB header:dna binding protein Chain: A: PDB Molecule:high mobility group protein 2; PDBTitle: solution structure of the n-terminal domain of the hmgb2 45 d1j3xa_ not modelled 13.8 26 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 46 d1wt8a1 not modelled 13.8 57 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Short-chain scorpion toxins 47 c2x4kB_ not modelled 13.4 16 PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of sar1376, a putative 4-oxalocrotonate2 tautomerase from the methicillin-resistant staphylococcus3 aureus (mrsa) 48 c2h5gA_ not modelled 13.4 7 PDB header:oxidoreductase Chain: A: PDB Molecule:delta 1-pyrroline-5-carboxylate synthetase; PDBTitle: crystal structure of human pyrroline-5-carboxylate synthetase 49 d1k99a_ not modelled 13.3 11 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 50 d1o9ja_ not modelled 13.2 17 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 51 c2d4eB_ not modelled 13.1 11 PDB header:oxidoreductase Chain: B: PDB Molecule:5-carboxymethyl-2-hydroxymuconate semialdehyde PDBTitle: crystal structure of the hpcc from thermus thermophilus hb8 52 c2co9A_ not modelled 13.1 15 PDB header:transcription Chain: A: PDB Molecule:thymus high mobility group box protein tox; PDBTitle: solution structure of the hmg_box domain of thymus high2 mobility group box protein tox from mouse 53 c2crjA_ not modelled 13.1 27 PDB header:gene regulation Chain: A: PDB Molecule:swi/snf-related matrix-associated actin- PDBTitle: solution structure of the hmg domain of mouse hmg domain2 protein hmgx2 54 d1smsa_ not modelled 12.9 20 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 55 d1jk0b_ not modelled 12.9 18 Fold:Ferritin-like Superfamily:Ferritin-like Family:Ribonucleotide reductase-like 56 d1bi9a_ not modelled 12.7 23 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 57 d1ad3a_ not modelled 12.6 12 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 58 d1oqen_ not modelled 12.5 25 Fold:TNF receptor-like Superfamily:TNF receptor-like Family:BAFF receptor-like 59 c2k9mA_ not modelled 12.4 22 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 60 c3k9dD_ not modelled 12.2 8 PDB header:oxidoreductase Chain: D: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of probable aldehyde dehydrogenase from listeria2 monocytogenes egd-e 61 c3odeA_ not modelled 12.1 8 PDB header:dna binding protein/dna Chain: A: PDB Molecule:poly [adp-ribose] polymerase 1; PDBTitle: human parp-1 zinc finger 2 (zn2) bound to dna 62 c2w8qA_ not modelled 11.9 19 PDB header:oxidoreductase Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase, PDBTitle: the crystal structure of human ssadh in complex with ssa. 63 d1o04a_ not modelled 11.9 16 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 64 c3qpiA_ not modelled 11.8 19 PDB header:oxidoreductase Chain: A: PDB Molecule:chlorite dismutase; PDBTitle: crystal structure of dimeric chlorite dismutases from nitrobacter2 winogradskyi 65 c3abfB_ not modelled 11.7 16 PDB header:isomerase Chain: B: PDB Molecule:4-oxalocrotonate tautomerase; PDBTitle: crystal structure of a 4-oxalocrotonate tautomerase homologue2 (tthb242) 66 c3b4wA_ not modelled 11.7 15 PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of mycobacterium tuberculosis aldehyde dehydrogenase2 complexed with nad+ 67 c3k2wD_ not modelled 11.7 21 PDB header:oxidoreductase Chain: D: PDB Molecule:betaine-aldehyde dehydrogenase; PDBTitle: crystal structure of betaine-aldehyde dehydrogenase from2 pseudoalteromonas atlantica t6c 68 c3qanB_ not modelled 11.6 15 PDB header:oxidoreductase Chain: B: PDB Molecule:1-pyrroline-5-carboxylate dehydrogenase 1; PDBTitle: crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from2 bacillus halodurans 69 c2jg7G_ not modelled 11.6 19 PDB header:oxidoreductase Chain: G: PDB Molecule:antiquitin; PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity 70 c2hg2A_ not modelled 11.4 15 PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde dehydrogenase a; PDBTitle: structure of lactaldehyde dehydrogenase 71 d1bxsa_ not modelled 11.3 20 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 72 d1ag8a_ not modelled 11.2 20 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 73 d1gt0d_ not modelled 11.1 14 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 74 c3lnsD_ not modelled 10.9 11 PDB header:oxidoreductase Chain: D: PDB Molecule:benzaldehyde dehydrogenase; PDBTitle: benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with2 bound nadp+ and benzoate adduct 75 c3ju8B_ not modelled 10.8 17 PDB header:oxidoreductase Chain: B: PDB Molecule:succinylglutamic semialdehyde dehydrogenase; PDBTitle: crystal structure of succinylglutamic semialdehyde dehydrogenase from2 pseudomonas aeruginosa. 76 c2ivfB_ not modelled 10.7 28 PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum 77 c1wz6A_ not modelled 10.7 19 PDB header:transcription Chain: A: PDB Molecule:hmg-box transcription factor bbx; PDBTitle: solution structure of the hmg_box domain of murine bobby2 sox homolog 78 c2p1iA_ not modelled 10.7 14 PDB header:oxidoreductase Chain: A: PDB Molecule:ribonucleotide reductase, small chain; PDBTitle: plasmodium yoelii ribonucleotide reductase subunit r2 (py03671) 79 c2dmjA_ not modelled 10.7 12 PDB header:transferase Chain: A: PDB Molecule:poly (adp-ribose) polymerase family, member 1; PDBTitle: solution structure of the first zf-parp domain of human2 poly(adp-ribose)polymerase-1 80 d1mwwa_ not modelled 10.7 17 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:Hypothetical protein HI1388.1 81 d1lwma_ not modelled 10.7 19 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 82 d3c7bb1 not modelled 10.4 17 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 83 c2cs1A_ not modelled 10.3 23 PDB header:dna binding protein Chain: A: PDB Molecule:pms1 protein homolog 1; PDBTitle: solution structure of the hmg domain of human dna mismatch2 repair protein 84 c2c7mA_ not modelled 9.9 39 PDB header:protein-binding Chain: A: PDB Molecule:rab guanine nucleotide exchange factor 1; PDBTitle: human rabex-5 residues 1-74 in complex with ubiquitin 85 c2kn0A_ not modelled 9.8 36 PDB header:apoptosis Chain: A: PDB Molecule:fn14; PDBTitle: solution nmr structure of xenopus fn14 86 c3iwkB_ not modelled 9.8 21 PDB header:oxidoreductase Chain: B: PDB Molecule:aminoaldehyde dehydrogenase; PDBTitle: crystal structure of aminoaldehyde dehydrogenase 1 from2 pisum sativum (psamadh1) 87 c2gmhA_ not modelled 9.8 22 PDB header:oxidoreductase Chain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone 88 c2k9lA_ not modelled 9.8 24 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 89 d1hsma_ not modelled 9.7 15 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 90 c1mv4B_ not modelled 9.5 36 PDB header:de novo protein Chain: B: PDB Molecule:tropomyosin 1 alpha chain; PDBTitle: tm9a251-284: a peptide model of the c-terminus of a rat2 striated alpha tropomyosin 91 d2c7na1 not modelled 9.5 39 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:A20-like zinc finger 92 c1hmfA_ not modelled 9.4 15 PDB header:dna-binding Chain: A: PDB Molecule:high mobility group protein fragment-b; PDBTitle: structure of the hmg box motif in the b-domain of hmg1 93 d1hmfa_ not modelled 9.4 15 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 94 d1a4sa_ not modelled 9.4 19 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 95 c2vroB_ not modelled 9.2 12 PDB header:oxidoreductase Chain: B: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from2 burkholderia xenovorans lb400 96 c3mhsE_ not modelled 9.2 29 PDB header:hydrolase/transcription regulator/protei Chain: E: PDB Molecule:saga-associated factor 73; PDBTitle: structure of the saga ubp8/sgf11/sus1/sgf73 dub module bound to2 ubiquitin aldehyde 97 c3ifgH_ not modelled 9.1 15 PDB header:oxidoreductase Chain: H: PDB Molecule:succinate-semialdehyde dehydrogenase (nadp+); PDBTitle: crystal structure of succinate-semialdehyde dehydrogenase from2 burkholderia pseudomallei, part 1 of 2 98 c1t90B_ not modelled 9.0 19 PDB header:oxidoreductase Chain: B: PDB Molecule:probable methylmalonate-semialdehyde PDBTitle: crystal structure of methylmalonate semialdehyde2 dehydrogenase from bacillus subtilis 99 c3my7A_ not modelled 9.0 8 PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase/acetaldehyde dehydrogenase; PDBTitle: the crystal structure of the acdh domain of an alcohol dehydrogenase2 from vibrio parahaemolyticus to 2.25a